| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4859457 = | 95 (1.020) | 5 (0.060) | 5/240 | NT | 5.2% | coding (1638/2331 nt) | ligA | DNA ligase |
| ? | NC_002947 | 4859494 = | 92 (1.030) | coding (1601/2331 nt) | ligA | DNA ligase | |||||
GAAGGCTTCGCCGAGGTGTCTACCCAGAAGCTGCTGGATGCCATTGAAGCCAGCAAGCGCCCGAGCCTGGCGCGCTTCATCTACGCGCTGGGCATCCCGGATGTCGGCGAGGAGACCGCCAAGGTGCTGGCCCGCTCGCTGGGCAG‑‑CC‑TGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4859609‑4859457‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGACCTGCTCGAACTGCAGCTTGTA > NC_002947/4859494‑4859642 GAAGGCTTCGCCGAGGTGTCTACCCAGAAGCTGCTGGATGCCATTGAAGCCAGCAAGCGCCCGAGCCTGGCGCGCTTCATCTACGCGCTGGGCATCCCGGATGTCGTCGAGGATACCGCCTAGTTTCTGGCCCGCTCGCTGGGCAG‑‑CC‑TG > 2:2229906/1‑150GAAGGCTTCGCCGAGGTGTCTACCCAGAAGCTGCTGGATGCCATTGAAGCCAGCAAGCGCCCGAGCCTGGCGCGCTTCATCTACGCGCTGGGCATCCCGGATGTCGGCGAGGAGACCGCCAAGGTGCTGGCCCGCTCGCTGGGCAG‑‑CC‑TG < 2:1392303/150‑1GAAGGCTTCGCCGAGGTGTCTACCCAGAAGCTGCTGGATGCCATTGAAGCCAGCAAGCGCCCGAGCCTGGCGCGCTTCATCTACGCGCTGGGCATCCCGGATGTCGGCGAGGAGACCGCCAAGGTGCTGGCCCGCTCGCTGGGCAG‑‑CC‑TG > 2:451005/1‑150 AGGCTTCGCCGAGGTGTCTACCCAGAAGCTGCTGGATGCCATTGAAGCCAGCAATCGCCCGAGCCTGCCGCGCTTCATCTACGCGCTGGGCATCCCGGATGTCGGCGAGGAGACCGCCAAGGTGCTGGCCCGCTCGCTGGGCAG‑‑CC‑TGGC < 1:763491/150‑1 AGGCTTCGCCGAGGTGTCTACCCAGAAGCTGCTGGATGCCATTGAAGCCAGCAAGCGCCCGAGCCTGGCGCGCTTCATCTACGCGCTGGGCATCCCGGATGTCGGCGAGGAGACCGCCAAGGTGCTGGCCCGCTCGCTGGGCAG‑‑CC‑TGGC < 1:2360481/150‑1 AGGCTTCGCCGAGGTGTCTACCCAGAAGCTGCTGGATGCCATTGAAGCCAGCAAGCGCCCGAGCCTGGCGCGCTTCATCTACGCGCTGGGCATCCCGGATGTCGGCGAGGAGACCGCCAAGGTGCTGGCCCGCTCGCTGGGCAG‑‑CC‑TGGC < 1:996823/150‑1 AGGCTTCGCCGAGGTGTCTACCCAGAAGCTGCTGGATGCCATTGAAGCCAGCAAGCGCCCGAGCCTGGCGCGCTTCATCTACGCGCTGGGCATCCCGGATGTCGGCGAGGAGACCGCCAAGGTGCTGGCCCGCTCGCTGGGCAG‑‑CC‑TGGC < 2:868721/150‑1 CGCCAAGGTGCTGGCCCGCTCGCTGGGCAG‑‑CC‑TGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCC > 2:1079494/1‑150 GCCAAGGTGCTGGCCCGCTCGCTGGGCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTC > 1:741168/1‑93 GCCAAGGTGCTGGCCCGCTCGCTGGGCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTC < 2:741168/93‑1 CCAAGGTGCTGGCCCGCTCGCTGGGCAG‑‑CC‑TGGCGGTCTCCTCGCCGACATCGGGGATGCCCAGCGCGTAGA > 1:1063895/1‑72 CCAAGGTGCTGGCCCGCTCGCTGGGCAG‑‑CC‑TGGCGGTCTCCTCGCCGACATCGGGGATGCCCAGCGCGTAGA < 2:1063895/72‑1 GGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGACCTGCTCGAACTGCAGCTTGTA < 1:996425/150‑1 GGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTCGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGTCGACCTGCTCGAACTGCAGCTTGTA < 1:1916547/150‑1 GAAGGCTTCGCCGAGGTGTCTACCCAGAAGCTGCTGGATGCCATTGAAGCCAGCAAGCGCCCGAGCCTGGCGCGCTTCATCTACGCGCTGGGCATCCCGGATGTCGGCGAGGAGACCGCCAAGGTGCTGGCCCGCTCGCTGGGCAG‑‑CC‑TGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4859609‑4859457‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGACCTGCTCGAACTGCAGCTTGTA > NC_002947/4859494‑4859642 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |