BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4859457 =	95 (1.020)	5 (0.060)	5/240	NT	5.2%	coding (1638/2331 nt)	ligA	DNA ligase
*	?	NC_002947	4859494 =	92 (1.030)	5 (0.060)	5/240	NT	5.2%	coding (1601/2331 nt)	ligA	DNA ligase

Only 100 of 125 total aligned reads displayed.

GTTGTGCTCGTCTTCAAAGAAATTGTGGATCTCGTAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGACCTGCTCGAACTGCAGCTTGTAC  >  NC_002947/4859358‑4859643

gTTGTGCTCGTCTTCAAAGAAATTGTGGATCTCGTAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGAc                                                                                                                                          >  1:449483/1‑150 (MQ=255)

 ttGTGCTCGTCTTCAAAGAAATTGTGGATCTCGTAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACa                                                                                                                                         >  1:29866/1‑150 (MQ=255)

    tgCTCGTCTTCAAAGAAATTGTGGATCTCGTAGGCCACTTCGAGACCGATATCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATcc                                                                                                                                      >  2:339215/1‑150 (MQ=255)

     gCTCGTCTTCAAAGAAATTGTGGATCTCGTAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCg                                                                                                                                     >  1:2175912/1‑150 (MQ=255)

      cTCGTCTTCAAAGAAATTGTGGATCTCGTAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCgg                                                                                                                                    <  2:2106829/150‑1 (MQ=255)

       tCGTCTTCAAAGAAATTGTGGATCTCGTAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCggg                                                                                                                                   >  2:12956/1‑150 (MQ=255)

       tCGTCTTCAAAGAAATTGTGGATCTCGTAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCggg                                                                                                                                   >  1:2229906/1‑150 (MQ=255)

              cAAAGAAATTGTGGATCTCGTAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATACGGGATGccaa                                                                                                                            <  2:473210/150‑3 (MQ=255)

               aaaGAAATTGTGGATCTCGTAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAg                                                                                                                           >  1:2198157/1‑150 (MQ=255)

               aaaGAAATTGTGGATCTCGTAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAg                                                                                                                           >  1:2152182/1‑150 (MQ=255)

                aaGAAATTGTGGATCTCGTAGGCCACTTCGAGACCGATAAAAAGAAAATAGGTCAGCACCTACGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGACGGTCTCCTCGCCGACATCCGGGATGCCCAga                                                                                                                          >  2:243003/1‑149 (MQ=255)

                 aGAAATTGTGGATCTCGTAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAgcg                                                                                                                         >  1:1011689/1‑150 (MQ=255)

                 aGAAATTGTGGATCTCGTAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAgcg                                                                                                                         >  2:480395/1‑150 (MQ=255)

                     aTTGTGGATCGCGTAGGCCACTTCGAGACCGAGGTCCCGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGAGAGCGGGCCAGCAGCTTGGCGGTCTCCTCGCCGACATCCGGGATGAACAGCGCGTa                                                                                                                     <  1:299468/150‑1 (MQ=255)

                        gtgGATCTCGTAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGAt                                                                                                                  <  1:704137/150‑1 (MQ=255)

                           gATCTCGTAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGACCAGCGCGTAGATGaa                                                                                                               >  2:1219375/1‑150 (MQ=255)

                           gATCTCGTAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGACAAGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGCTGaa                                                                                                               >  1:1113405/1‑150 (MQ=255)

                            aTCTCGTAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAg                                                                                                              >  2:1832304/1‑150 (MQ=255)

                                  tAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGcc                                                                                                        >  2:2326296/1‑150 (MQ=255)

                                   aGGCCACTTGGAGGCCGATGTTCGGCAAATAGGTCAGCACCTGCGGCAATGCGTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGTCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCa                                                                                                       <  2:461117/150‑1 (MQ=255)

                                     gCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAgg                                                                                                     >  2:820686/1‑150 (MQ=255)

                                      ccACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGc                                                                                                    >  1:385680/1‑150 (MQ=255)

                                        aCTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGa                                                                                                                   >  2:2062262/1‑133 (MQ=255)

                                        aCTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGa                                                                                                                   <  1:2062262/133‑1 (MQ=255)

                                        aCTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTc                                                                                                  >  2:1800304/1‑150 (MQ=255)

                                          ttCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCgg                                                                                                <  2:29866/150‑1 (MQ=255)

                                             gagaCCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGgcg                                                                                             >  2:549825/1‑150 (MQ=255)

                                                  cGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGc                                                                                        >  2:2122512/1‑150 (MQ=255)

                                                     tGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTgg                                                                                     >  1:2369361/1‑150 (MQ=255)

                                                     tGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTgg                                                                                     <  2:2175912/150‑1 (MQ=255)

                                                         cGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGt                                                                                                                                                      >  2:699743/1‑81 (MQ=255)

                                                         cGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGGTGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTc                                                                                 >  1:1319356/1‑150 (MQ=255)

                                                         cGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTc                                                                                 >  2:800773/1‑150 (MQ=255)

                                                         cGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTc                                                                                 >  1:352290/1‑150 (MQ=255)

                                                         cGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTc                                                                                 >  1:203607/1‑150 (MQ=255)

                                                            cAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAAt                                                                              <  2:53488/150‑1 (MQ=255)

                                                               aTAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGAt                                                                                                                                 >  1:1085215/1‑96 (MQ=255)

                                                                tAGGACAGCACCGGCTGCAAGGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCa                                                                          <  2:1319356/150‑1 (MQ=255)

                                                                  ggTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATc                                                                        >  2:253736/1‑150 (MQ=255)

                                                                     cAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCcag                                                                     >  2:1157805/1‑150 (MQ=255)

                                                                       gCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCcagca                                                                   <  2:385680/150‑1 (MQ=255)

                                                                        cACNTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCcagcag                                                                  >  2:1507564/1‑150 (MQ=255)

                                                                           cTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCtt                                                               >  1:2037807/1‑150 (MQ=255)

                                                                            tGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTc                                                              >  2:2341774/1‑150 (MQ=255)

                                                                             gCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCt                                                             <  2:1058374/150‑1 (MQ=255)

                                                                              cGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTg                                                            <  2:1068176/150‑1 (MQ=255)

                                                                               tgCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCGAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGCTGCCCAGCGCGTAGATGAAGCGGGCCACGCTCGGGCGCTTGCTAGCTTCAATGGCATCCAGCAGTTTCTgg                                                           <  2:1162781/149‑1 (MQ=255)

                                                                               gtcAATGTCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTgg                                                           <  2:2206893/148‑1 (MQ=255)

                                                                               ggCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTgg                                                           <  2:1859377/150‑1 (MQ=255)

                                                                               ggCAATGCCTGCTGAACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTgg                                                           >  1:655738/1‑150 (MQ=255)

                                                                                  aaTGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTa                                                        <  1:339215/150‑1 (MQ=255)

                                                                                  aaTGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTa                                                        <  2:2312111/150‑1 (MQ=255)

                                                                                   aTGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAg                                                       >  1:871906/1‑150 (MQ=255)

                                                                                       ctgctgCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGacac                                                   >  1:1653179/1‑150 (MQ=255)

                                                                                        tgctgcACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAg                                                                                                      >  1:1918822/1‑98 (MQ=255)

                                                                                        tgctgcACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAg                                                                                                      <  2:1918822/98‑1 (MQ=255)

                                                                                        tgctgcACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTTCATGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACAcc                                                  >  1:124377/1‑150 (MQ=255)

                                                                                           tgcACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCg                                               >  1:451005/1‑150 (MQ=255)

                                                                                                gcgcgcCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGaa                                          <  1:12956/150‑1 (MQ=255)

                                                                                                gcgcgcCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGaa                                          <  2:2347621/150‑1 (MQ=255)

                                                                                                gcgcgcCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGaa                                          <  2:203607/150‑1 (MQ=255)

                                                                                                 gccaaggtgctggcccgctcgctgggcagcaccttggcgGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTc                                                                                                  <  2:741168‑M2/54‑1 (MQ=255)

                                                                                                 gccaaggtgctggcccgctcgctgggcagcaccttggcgGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTc                                                                                                  >  1:741168‑M2/40‑93 (MQ=255)

                                                                                                   cgccaaggtgctggcccgctcgctgggcagcctggcgGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGcc                                       >  2:1079494‑M2/38‑150 (MQ=255)

                                                                                                    GCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGGCAGGCTCGGGCGATTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCt                                      <  1:763491‑M1/150‑1 (MQ=255)

                                                                                                    GCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCt                                      <  1:996823‑M1/150‑1 (MQ=255)

                                                                                                    GCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCt                                      <  1:2360481‑M1/150‑1 (MQ=255)

                                                                                                    GCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCt                                      <  2:868721‑M1/150‑1 (MQ=255)

                                                                                                     ccaaggtgctggcccgctcgctgggcagcctggcgGTCTCCTCGCCGACATCGGGGATGCCCAGCGCGTAGa                                                                                                                   >  1:1063895‑M2/36‑72 (MQ=255)

                                                                                                     ccaaggtgctggcccgctcgctgggcagcctggcgGTCTCCTCGCCGACATCGGGGATGCCCAGCGCGTAGa                                                                                                                   <  2:1063895‑M2/37‑1 (MQ=255)

                                                                                                      CAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTc                                    >  2:451005‑M1/1‑150 (MQ=255)

                                                                                                      CAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTc                                    <  2:1392303‑M1/150‑1 (MQ=255)

                                                                                                      CAGGCTGCCCAGCGAGCGGGCCAGAAACTAGGCGGTATCCTCGACGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTc                                    >  2:2229906‑M1/1‑150 (MQ=255)

                                                                                                           tGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAg                                         >  2:2071789/1‑140 (MQ=255)

                                                                                                           tGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAg                                         <  1:2071789/140‑1 (MQ=255)

                                                                                                           tGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGc                               <  1:868721/150‑1 (MQ=255)

                                                                                                              ccAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGaa                                          <  2:775881/136‑1 (MQ=255)

                                                                                                              ccAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGaa                                          >  1:775881/1‑136 (MQ=255)

                                                                                                                 gcgagcgGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCcgacga                         <  1:549825/150‑1 (MQ=255)

                                                                                                                  cgagcgGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGAGGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCgacgac                        <  1:161076/150‑1 (MQ=255)

                                                                                                                      cgGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGACCTGc                    <  1:1507564/150‑1 (MQ=255)

                                                                                                                        ggCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGACCTGCTc                  <  1:2326296/150‑1 (MQ=255)

                                                                                                                           cAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGACCTGCTCGaa               >  2:372941/1‑150 (MQ=255)

                                                                                                                            aGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGACCTGCTCGAAc              <  2:2198157/150‑1 (MQ=255)

                                                                                                                               aCCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGACCTGCTCGAACTGc           <  1:1219375/150‑1 (MQ=255)

                                                                                                                               aCCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGACCTGCTCGAACTGc           <  2:871906/150‑1 (MQ=255)

                                                                                                                                ccTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGACCTGCTCGAACTGCa          <  1:1832304/150‑1 (MQ=255)

                                                                                                                                ccTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGACCCGCTCGAACTGCa          >  1:294041/1‑150 (MQ=255)

                                                                                                                                 cTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCca                                                                      <  1:1765579/89‑1 (MQ=255)

                                                                                                                                 cTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCca                                                                      >  2:1765579/1‑89 (MQ=255)

                                                                                                                                 cTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCTACGACCTGCTCGAACTGCAg         >  2:1136229/1‑150 (MQ=255)

                                                                                                                                 cTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGAcc                       <  1:1913502/136‑1 (MQ=255)

                                                                                                                                 cTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGAcc                       >  2:1913502/1‑136 (MQ=255)

                                                                                                                                 cTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGACCTGCTCGAACTGCac         >  2:2001770/1‑149 (MQ=255)

                                                                                                                                  ttGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGATGACCTGCTCGAACTGCAGc        <  1:480395/150‑1 (MQ=255)

                                                                                                                                  ttGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGACCTGCTCGAACTGCAGc        <  1:2341774/150‑1 (MQ=255)

                                                                                                                                       gGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGACCTGCTCGAACTGCAGCTTGTa   <  1:996425‑M2/149‑1 (MQ=255)

                                                                                                                                       gGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTCGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGTCGACCTGCTCGAACTGCAGCTTGTa   <  1:1916547‑M2/149‑1 (MQ=255)

                                                                                                                                        gTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATcc                                                                       >  1:641620/1‑81 (MQ=255)

                                                                                                                                        gTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATcc                                                                       <  2:641620/81‑1 (MQ=255)

GTTGTGCTCGTCTTCAAAGAAATTGTGGATCTCGTAGGCCACTTCGAGACCGATGTCCGGCAAATAGGTCAGCACCTGCGGCAATGCCTGCTGCACGCGCGCCAGGCTGCCCAGCGAGCGGGCCAGCACCTTGGCGGTCTCCTCGCCGACATCCGGGATGCCCAGCGCGTAGATGAAGCGCGCCAGGCTCGGGCGCTTGCTGGCTTCAATGGCATCCAGCAGCTTCTGGGTAGACACCTCGGCGAAGCCTTCCAGGCCGACGACCTGCTCGAACTGCAGCTTGTAC  >  NC_002947/4859358‑4859643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.