New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4881304 =	99 (1.060)	5 (0.060)	5/234	NT	5.7%	coding (342/1356 nt)	uacT	uric acid permease
	?	NC_002947	4881350 =	74 (0.850)					coding (388/1356 nt)	uacT	uric acid permease

TGGCCGCCACCGGCCCAGTTGACAGCCACCGGGAACAGCGACAGGCCAATCGAGGTGATCACCGTACCGGTGACCAGCGGTGGGAAGAAGCGGACAACCTTGGACATGAACGGCGCGATCAGCATGCCGAAGAACCCGGCAGCGATGGTCGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4881459‑4881304 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgccgTTCATGTCCAAGGTTGTCCGCTTCTTCCCACCGCTGGTCACCGGTACGGTGATCACCTCGATTGGCCTGTCGCTGTTCCCGGTGGCTGTCAACTGGGCCGGTGGCGGCCATGAAGCAGAAACGTTCGGCTCGCCGATCTACCTGCTGGT  >  NC_002947/4881350‑4881498                                                                                                                                                                                                                                                                                                                   TGGCCGCCACCGGCCCAGTTGACAGCCACCGGGAACAGCGACAGGCCAATCGAGGTGATCACCGTACCGGTGACCAGCGGTGGGAAGAAGCGGACAACCTTGGACATGAACGGCGCGATCAGCATGCCGAAGAACCCGGCAGCGATGGTC                                                                                                                                                             <  2:111673/150‑1  GGCCGCCACCGGCCCAGTTGACAGCCACCGGGAACAGCGACAGGCCAATCGAGGTGATCACCGTACCGGTGACCAGCGGTGGGAAGAAGCGGACAACCTTGGACATGAACGGCGCGATCAGCATGCCGAAGAACCCGGCAGCGATGGTCG                                                                                                                                                            >  2:841435/1‑150     CGCCACCGGCTCAGTGGACAGCCACCGGGAACAGCGACAGGCCAATCGAGGTGATCACCGTCCCGGTGACCCGCGGTGGGAAGAAGCGGACAACCTTGGACATGAGCGGCGCGATCAGCATGCCGAAGAACCCGGCAGCGATGGTCGCGC                                                                                                                                                         <  2:250133/150‑1     CGCCACCGGCCCAGTTGACAGCCACCGGGAACAGCGACAGGCCAATCGAGGTGATCACCGTACCGGTGACCAGCGGTGGGAAGAAGCGGACAACCTTGGACATGAACGGCGCGATCAGCATGCCGAAGAACCCGGCAGCGATGGTCGCGC                                                                                                                                                         >  2:2428570/1‑150                                                                                                                   GCGATCAGCATGCCGAAGAACCCGGCAGCGATGGTCGCGCCGTTCATGTCCAAGGTTGTCCGCTTCTTCCCACCGCTGGTCACCGGTACGGTGATCACCTCGATTGGCCTGTCGCTGTTCCCGGTGGCTGTCAACTGGGCCGGTGGCGGC                                           >  2:590338/1‑150                                                                                                                     GATCAGCATGCCGAAGAACCCGGCAGCGATGGTCGCGCCGTTCATGTCCAAGGTTGTCCGCTTCTTCCCACCGCTGGTCACCGGTACGGTGATCACCTCGATTGGCCTGTC                                                                                >  1:2183479/1‑111                                                                                                                     GATCAGCATGCCGAAGAACCCGGCAGCGATGGTCGCGCCGTTCATGTCCAAGGTTGTCCGCTTCTTCCCACCGCTGGTCACCGGTACGGTGATCACCTCGATTGGCCTGTC                                                                                <  2:2183479/111‑1                                                                                                                      ATCAGCATGCCGAAGAACCCGGCAGCGATGGTCGCGCCGTTCATGTCCAAGGTTGTCCGCTTCTTCCCACCGCTGGTCAC                                                                                                              <  1:2162846/80‑1                                                                                                                      ATCAGCATGCCGAAGAACCCGGCAGCGATGGTCGCGCCGTTCATGTCCAAGGTTGTCCGCTTCTTCCCACCGCTGGTCAC                                                                                                              >  2:2162846/1‑80                                                                                                                                                     TCGCGCCGTTCATGTCCAAGGTTGTCCGCTTCTTCCCACCGCTGGTCACCGGTACGGTGATCACCTCGATTGGCCTGTCGCTGTTCCCGGTGGCTGTCAACTGGGCCGGTGGCGGCCATGAAGCAGAAACGTTCGGCTCGCCGATCTACC         >  2:1546168/1‑150                                                                                                                                                         GCCGTTCATGTCCAAGGTTGTCCGCTTCTTCCCACCGCTGGTCACCGGTACGGTGATCACCTCGATTGGCCTGTCGCTGTTCCCGGTGGCTGTCAACTGGGCCGGTGGCGGCCATGAAGCAGAAACGTTCGGCTCGCCGATCTACCTGCT     >  2:2329705/1‑150                                                                                                                                                         GCCGTTCATGTCCAAGGTTGTCCGCTTCTTCCCACCGCTGGTCACCGGTACGGTGATCACCTCGATTGGCCTGTCGCTGTTCCCGGTGGCTGTCAACTGGGCCGATGGCGGCCATGAAGCAGAAACGTTCGGCTCGCCGATCTACCTGCT     >  1:1966976/1‑150                                                                                                                                                          CCGTTCATGTCCAAGGTTGTCCGCTTCTTCCCACCGCTGGTCACCGGTACGGTGATCACCTCGATTGGCCTGTCGCTGTTCCCGGTGGCTGTCAACTGGGCCGGTGGCGGCCATGAAGCAGAAACGTTCGGCTCGCCGATCTACCTGCTG    >  2:724749/1‑150                                                                                                                                                            GTTCATGTCCAAGGTTGTCCGCTTCTTCCCACCGCTGGTCACCGGTACGGTGATCACCTCGATTGGCCTGTCGCTGTTCCCGGTGGCTGTCAACTGGGCCGGTGGCGGCCATGAAGCAGAAACGTTCGGCTCGCCGATCTACCTGCTGGT  >  1:648106/1‑150                                                                                                                                                                                                                                                                                                                   TGGCCGCCACCGGCCCAGTTGACAGCCACCGGGAACAGCGACAGGCCAATCGAGGTGATCACCGTACCGGTGACCAGCGGTGGGAAGAAGCGGACAACCTTGGACATGAACGGCGCGATCAGCATGCCGAAGAACCCGGCAGCGATGGTCGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4881459‑4881304 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcgccgTTCATGTCCAAGGTTGTCCGCTTCTTCCCACCGCTGGTCACCGGTACGGTGATCACCTCGATTGGCCTGTCGCTGTTCCCGGTGGCTGTCAACTGGGCCGGTGGCGGCCATGAAGCAGAAACGTTCGGCTCGCCGATCTACCTGCTGGT  >  NC_002947/4881350‑4881498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.