| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5115779 | 92 (0.990) | 7 (0.080) | 6/242 | NT | 7.6% | coding (55/861 nt) | PP_4500 | TrpH family protein |
| ? | NC_002947 | = 5115795 | 81 (0.900) | coding (39/861 nt) | PP_4500 | TrpH family protein | |||||
GCCCCACGTGCAGGACAGCTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5115627‑5115779‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaCGGCGCCCTGTCGCCTTCGGTACTGGTTGCCCGGGCTCATGAGCACGGGGTGCAAGCGCTGGCACTGACCGACCATGACACCCTCGAAGGCCTGCCCGAAGCGCGCCAGGCCTGCGTTGACCTGGGTATGCGCTGGGTCAGCGGGGTG < NC_002947/5115795‑5115648 GCCCCACGTGCAGGACAGCTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTAC < 1:276690/150‑1GCCCCACGAGCAGGACCGCTCCACAGCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTAC < 2:2358335/150‑1 CCACGTGCAGGACAGCTCCACCCCGCTGACCCAGCGCATACCCATGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGA > 2:2301403/1‑150 CCACGTGCAGGACAGCTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCATGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGA > 2:1806643/1‑150 CCACGTGCAGGACAGCTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCGGTACCGA > 1:609857/1‑150 CCACGTGCAGGACAGCTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGA > 2:1545219/1‑150 CCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGACGGCGCCCTGTCGCCTTCGG < 1:2295081/150‑1 GGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGACGGCGCCCTGTCGCCTTCG > 1:295457/1‑86 GGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGACGGCGCCCTGTCGCCTTCG < 2:295457/86‑1 CAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGACGGCGCCCTGTCGCCTTCG < 1:2302166/64‑1 CAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGACGGCGCCCTGTCGCCTTCG > 2:2302166/1‑64 TTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGACGGCGCCCTGTCGCCTTCGGTACTGGTTG < 1:1344464/68‑1 TTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGACGGCGCCCTGTCGCCTTCGGTACTGGTTG > 2:1344464/1‑68 CGACGGCGCCCTGTCGCCTTCGGTACTGGTTGCCCGGGCTCATGAGCACGGGGTGCAAGCGCTGGCACTGACCGACCATGACACCCTCGAAGGCCTGCCCGAAGCGCGCCAGGCCTGCGTTGACCTGGGTATGCGCTGGGTCAGCGGGGT > 2:938554/1‑150 GACGGCGCCCTGTCGCCTTCGGTACTGGTTGCCCGGGCTCATGAGCACGGGGTGCAAGCGCTGGCACTGACCGACCATGACACCCTCGAAGGCCTGCCCGAAGCGCGCCAGGCCTGCGTTGACCTGGGTATGCGCTGGGTCAGCGGGGTG < 1:1296898/150‑1 GCCCCACGTGCAGGACAGCTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5115627‑5115779‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgaCGGCGCCCTGTCGCCTTCGGTACTGGTTGCCCGGGCTCATGAGCACGGGGTGCAAGCGCTGGCACTGACCGACCATGACACCCTCGAAGGCCTGCCCGAAGCGCGCCAGGCCTGCGTTGACCTGGGTATGCGCTGGGTCAGCGGGGTG < NC_002947/5115795‑5115648 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |