New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 511577992 (0.990)7 (0.080) 6/242 NT 7.6% coding (55/861 nt) PP_4500 TrpH family protein
?NC_002947 = 5115795 81 (0.900)coding (39/861 nt) PP_4500 TrpH family protein

Only 100 of 120 total aligned reads displayed.

CCACGTGCAGGACAGCTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGCTGCCATTGTGAAACAATTCATCGATTTCATCCC  >  NC_002947/5115630‑5115926
                                                                                                                                                     |                                                                                                                                                   
ccACGTGCAGGACAGCTCCACCCCGCTGACCCAGCGCATACCCATGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGA                                                                                                                                                     >  2:2301403‑M1/1‑150 (MQ=255)
ccACGTGCAGGACAGCTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCATGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGA                                                                                                                                                     >  2:1806643‑M1/1‑150 (MQ=255)
ccACGTGCAGGACAGCTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCGGTACCGA                                                                                                                                                     >  1:609857‑M1/1‑150 (MQ=255)
ccACGTGCAGGACAGCTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGA                                                                                                                                                     >  2:1545219‑M1/1‑150 (MQ=255)
   cGTGCAGGACAGCTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAgg                                                                                                                                                  <  2:248088/150‑1 (MQ=255)
   cGTGCAGGACAGCTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAgg                                                                                                                                                  >  2:1443599/1‑150 (MQ=255)
         ggACAGCTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAg                                                                                                                                            >  1:1899907/1‑150 (MQ=255)
             ggCTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGgcg                                                                                                                                        >  2:49536/2‑150 (MQ=255)
             aGCTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGgcg                                                                                                                                        >  2:2313090/1‑150 (MQ=255)
               cTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGcc                                                                                                                                      >  1:2052040/1‑150 (MQ=255)
               cTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTCAACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGcc                                                                                                                                      <  2:334864/150‑1 (MQ=255)
                tCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCg                                                                                                                                     >  2:362016/1‑150 (MQ=255)
                  cACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGtc                                                                                                                                   <  1:1296898‑M2/150‑3 (MQ=255)
                    ccccGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAcggcgccctgtcgccttcgg                                                                                                                                 <  1:2295081‑M1/150‑21 (MQ=255)
                     cccGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTCCCGAAGGCGACAGGGCGCCGTCGGa                                                                                                                                <  1:98344/150‑1 (MQ=255)
                     cccGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGa                                                                                                                                <  1:1418740/150‑1 (MQ=255)
                     cccGCCGACCCAGGGCCTCCCACGGTCACCGCAGGCATGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGa                                                                                                                                <  2:858051/150‑1 (MQ=255)
                      ccGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCCCGCCTGCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTCTTCATGGGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAg                                                                                                                               <  1:1023685/150‑1 (MQ=255)
                              ccAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCt                                                                                                                       >  2:2206920/1‑150 (MQ=255)
                               cAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCtg                                                                                                                      <  1:1545219/150‑1 (MQ=255)
                               cAGCGCATACCCAGGCCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCtg                                                                                                                      >  2:331772/1‑150 (MQ=255)
                                  cgcATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGa                                                                                                                   <  1:2313090/150‑1 (MQ=255)
                                   gcATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGAc                                                                                                                  <  2:1058317/150‑1 (MQ=255)
                                     aTACCCAGGTCAACGCATGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAg                                                                                                                <  1:1806643/150‑1 (MQ=255)
                                        cccAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGc                                                                                                             <  1:362016/150‑1 (MQ=255)
                                         ccAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGc                                                                                                                                                 >  1:49395/1‑113 (MQ=255)
                                         ccAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGc                                                                                                                                                 <  2:49395/113‑1 (MQ=255)
                                         ccAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGc                                                                                                             <  2:2419674/149‑1 (MQ=255)
                                         ccAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGc                                                                                                             >  1:2419674/1‑149 (MQ=255)
                                         ccAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGNGCa                                                                                                            <  2:1499896/150‑1 (MQ=255)
                                           aGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGaa                                                                                                                                                    <  2:1545867/108‑1 (MQ=255)
                                            ggTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGAt                                                                                                         <  2:631565/150‑1 (MQ=255)
                                              tCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCa                                                                                                       >  2:453099/1‑150 (MQ=255)
                                                aaCGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAAc                                                                                                     <  2:1605492/150‑1 (MQ=255)
                                                     ggggcTGGCGCGCTTCGGGCAGGCCTTCGGGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCa                                                                                                <  2:609857/146‑1 (MQ=255)
                                                          gggCGGGGTTCGGGCAGGCTTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACACTCATagag                                                                                           <  2:1085149/149‑1 (MQ=255)
                                                          gggCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATagag                                                                                           <  1:2301403/149‑1 (MQ=255)
                                                              gcgcTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAgc                                                                                       >  2:862609/1‑150 (MQ=255)
                                                                  ttCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGTGGGGTCGGAGGCTGGTGTGGGACAGTGCAGATCAACATTCATAGAGgcgcgcgt                                                                                   >  1:23905/1‑148 (MQ=255)
                                                                    cGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTc                                                                                 <  1:331772/150‑1 (MQ=255)
                                                                    cGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTc                                                                                 <  1:456212/150‑1 (MQ=255)
                                                                      ggCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGc                                                                               <  1:1443599/150‑1 (MQ=255)
                                                                       gCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCt                                                                              <  2:661649/150‑1 (MQ=255)
                                                                        cAGGCGTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTg                                                                             <  2:792650/150‑1 (MQ=255)
                                                                         aGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGcc                                                                                                                                      >  1:1205061/1‑92 (MQ=255)
                                                                          ggCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGa                                                                           >  1:1320105/1‑150 (MQ=255)
                                                                            ccTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATagag                                                                                           >  2:1997691/1‑132 (MQ=255)
                                                                            ccTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATagag                                                                                           <  1:1997691/132‑1 (MQ=255)
                                                                              ttCGAGGGTGTCATGGTCGGTCAGTGAAGATGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCg                                                                       >  1:665183/1‑150 (MQ=255)
                                                                                   gggTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAcggcgccctgtcgccttcg                                                                                                                                  <  2:295457‑M1/86‑20 (MQ=255)
                                                                                   gggTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAcggcgccctgtcgccttcg                                                                                                                                  >  1:295457‑M1/1‑67 (MQ=255)
                                                                                   gggTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCaa                                                                                                      >  1:2070810/1‑114 (MQ=255)
                                                                                   gggTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCaa                                                                                                      <  2:2070810/114‑1 (MQ=255)
                                                                                    ggTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATATGATAGCGCTTTCGCTGGATTCGAtgttt                                                                 <  1:1881370/150‑1 (MQ=255)
                                                                                         cATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATa                                                                                              <  1:1649948/116‑1 (MQ=255)
                                                                                         cATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATa                                                                                              >  2:1649948/1‑116 (MQ=255)
                                                                                          aTGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGAtgtttgtt                                                              <  1:1600652/147‑1 (MQ=255)
                                                                                                        ccAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGGTAATGATACGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATcc                                             <  2:665183/150‑1 (MQ=255)
                                                                                                         cAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATccc                                            >  2:728946/1‑150 (MQ=255)
                                                                                                            cgcTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGAt                                         <  1:792733/150‑1 (MQ=255)
                                                                                                               ttGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAcggcgccctgtcgccttcggtactggttg                                                                                                                        >  2:1344464‑M1/1‑39 (MQ=255)
                                                                                                               ttGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAcggcgccctgtcgccttcggtactggttg                                                                                                                        <  1:1344464‑M1/68‑30 (MQ=255)
                                                                                                               ttGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCt                                      >  1:1159329/1‑150 (MQ=255)
                                                                                                                  cACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGc                                   >  2:1161518/1‑150 (MQ=255)
                                                                                                                   aCCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGCt                                  >  1:1212122/1‑150 (MQ=255)
                                                                                                                   aCCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGCt                                  >  1:331058/1‑150 (MQ=255)
                                                                                                                     cccGTGCTCATGAGCCCGGGCAACCAGTACCGACGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATaga                                                                                            >  1:2409370/1‑90 (MQ=255)
                                                                                                                     cccGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGc                                                                                                                        >  1:1323302/1‑62 (MQ=255)
                                                                                                                     cccGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGc                                                                                                                        <  2:1323302/62‑1 (MQ=255)
                                                                                                                     cccGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATaga                                                                                            <  2:2409370/90‑1 (MQ=255)
                                                                                                                     cccGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGCTGc                                >  1:1796296/1‑150 (MQ=255)
                                                                                                                      ccGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGCTGcc                               >  2:489609/1‑150 (MQ=255)
                                                                                                                      ccGTGCTCATGAGCCCGGGCAACCAGTACCAAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGAAAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTCGCTGcc                               >  2:165635/1‑150 (MQ=255)
                                                                                                                      ccGGGCTCATGAGCACGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGCTGcc                               >  1:675928/1‑150 (MQ=255)
                                                                                                                            tCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGAtgttt                                                                 <  2:2269816/110‑1 (MQ=255)
                                                                                                                            tCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGAtgttt                                                                 >  1:2269816/1‑110 (MQ=255)
                                                                                                                              aTGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTgg                                    <  1:1324379/137‑1 (MQ=255)
                                                                                                                              aTGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGGGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTgg                                    >  2:1324379/1‑137 (MQ=255)
                                                                                                                               tGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGCTGCCATTGTGaaa                      <  2:1296898/150‑1 (MQ=255)
                                                                                                                                  gCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGCTGCCATtg                           <  2:1821253/142‑1 (MQ=255)
                                                                                                                                  gCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGCTGCCATTGTGAAACaa                   >  1:86873/1‑150 (MQ=255)
                                                                                                                                  gCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCCGTGACAGTGCAGATCAACATTCATAGAGGAGCTCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGCTGCCATTGTGAAACaa                   <  1:744321/150‑1 (MQ=255)
                                                                                                                                     cGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGc                                   >  2:1521577/1‑131 (MQ=255)
                                                                                                                                     cGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGc                                   <  1:1521577/131‑1 (MQ=255)
                                                                                                                                        gCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGCTGCCATTGTGAAACAATTCATc             >  1:1092034/1‑150 (MQ=255)
                                                                                                                                         cAACCAGTACCGAAGGCGACAGGGCGCCGtcggtactggttgcccgggctcatgagcacggggtgcaa                                                                                              >  2:1344464‑M2/1‑29 (MQ=255)
                                                                                                                                          aaCCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGCTGCCATTGTGAAACAATTCATCGa           <  1:220007/150‑1 (MQ=255)
                                                                                                                                           aCCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGCTGCCATTGTGAAACAATTCATCGAt          <  1:135642/150‑1 (MQ=255)
                                                                                                                                             cAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGttatta                                                          <  1:558708/100‑1 (MQ=255)
                                                                                                                                             cAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGCTGCCATTGTGAAACAATTCATCGAttt        >  2:536409/1‑150 (MQ=255)
                                                                                                                                              aGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGCTGCCATTGTGAAACAATTCATCGATTTc       >  1:1809746/1‑150 (MQ=255)
                                                                                                                                               gTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGa                                          >  1:846171/1‑114 (MQ=255)
                                                                                                                                               gTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGa                                          <  2:846171/114‑1 (MQ=255)
                                                                                                                                                tACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGCTGCCATTGTGAAACAATTCATCGATTTCAt     >  1:475368/1‑150 (MQ=255)
                                                                                                                                                  ccGAAGGCGACAGGGCGCCGtcggtactggttgcccgggctcatgagcacggggtgcaagcgctggcactgaccgaccatgacaccctcgaaggcctgcccgaagcgcgccaggcctgcgttgacctgggtatgcgctgggtcagcgggg   <  1:2295081‑M2/150‑131 (MQ=255)
                                                                                                                                                   cGAcggcgccctgtcgccttcggtactggttgcccgggctcatgagcacggggtgcaagcgctggcactgaccgaccatgacaccctcgaaggcctgcccgaagcgcgccaggcctgcgttgacctgggtatgcgctgggtcagcggggt  >  2:938554‑M1/1‑3 (MQ=255)
                                                                                                                                                   cGAAGGCGACAGGGCGCCGtcggtactggttgcccgggctcatgagcacggggtgcaagcgctggcactgaccgaccatgacaccc                                                                  <  2:295457‑M2/86‑68 (MQ=255)
                                                                                                                                                   cGAAGGCGACAGGGCGCCGtcggtactggttgcccgggctcatgagcacggggtgcaagcgctggcactgaccgaccatgacaccc                                                                  >  1:295457‑M2/1‑19 (MQ=255)
                                                                                                                                                   cGAAGGCGACAGGGCGCCGtcggtactggttgcccgggctcatgagcacggggtgcaagcgctg                                                                                        >  2:2302166‑M2/1‑19 (MQ=255)
                                                                                                                                                   cGAAGGCGACAGGGCGCCGtcggtactggttgcccgggctcatgagcacggggtgcaagcgctg                                                                                        <  1:2302166‑M2/64‑46 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CCACGTGCAGGACAGCTCCACCCCGCTGACCCAGCGCATACCCAGGTCAACGCAGGCCTGGCGCGCTTCGGGCAGGCCTTCGAGGGTGTCATGGTCGGTCAGTGCCAGCGCTTGCACCCCGTGCTCATGAGCCCGGGCAACCAGTACCGAAGGCGACAGGGCGCCGTCGGAGGCCGTGCTGTGACAGTGCAGATCAACATTCATAGAGGAGCGCTTTCGCTGGATTCGATGTTTGTTATTATGCCGTCACATCCCGATTCTGGCTGCCATTGTGAAACAATTCATCGATTTCATCCC  >  NC_002947/5115630‑5115926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.