| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5544518 = | 77 (0.830) | 9 (0.100) | 6/240 | NT | 10.1% | coding (391/426 nt) | rpsF | 30S ribosomal protein S6 |
| ? | NC_002947 | 5544547 = | 86 (0.960) | coding (362/426 nt) | rpsF | 30S ribosomal protein S6 | |||||
GTTATCCGTAACCTGGTCATCCGTCGCGACGAAGCCGTTACCGGCCAGTCCGAGATGCTGAAGGCTGAAGAGAACCGCAGCGAGCGCCGTGAGCGTCGCGAGCGTCCTGAGCATGCTGACTCCGCCGAAGGCGACGACAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5544659‑5544518‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaTGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACGGATAACGGCATCGTTGTAGCGGAAGTTGTCTTCCAGCTCGG > NC_002947/5544547‑5544694 GTTATCCGTAACCTGGTCATCCGTCGCGACGAAGCCGTTACCGGCCAGTCCGAGATGCTGAAGGCTGAAGAGAACCGCAGCGAGCGCCGTGAGCGTCGCGAGCGTCCTGAGCATGCTGACTCCGCCGAAGGCGACGACA < 1:215141/139‑1GTTATCCGTAACCTGGTCATCCGTCGCGACGAAGCCGTTACCGGCCAGTCCGAGATGCTGAAGGCTGAAGAGAACCGCAGCGAGCGCCGTGAGCGTCGCGAGCGTCCTGAGCATGCTGACTCCGCCGAAGGCGACGACA > 2:215141/1‑139 TGAGCATGCTGACTCCGCCGAAGGCGACGACAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACGGATAACGG > 2:2080141/1‑150 ATGCTGACTCCGCCGAAGGCGACGACAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACGGATAACGGCATCG > 1:2376122/1‑150 GCTGACTCCGCCGAAGGCGACGACAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCTCGACGGATGACCAGGTTACGGATAACGGCATCGTT > 1:1947991/1‑150 TGACTCCGCCGAAGGCGACGACAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACGGATAACGGCATCGTTGT > 2:799879/1‑150 TGACTCCGCCGAAGGCGACGACAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAAC > 1:2082541/1‑103 TGACTCCGCCGAAGGCGACGACAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAAC < 2:2082541/103‑1 TGACTCCGCCGAAGGCGACGACAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGG < 1:416142/65‑1 TGACTCCGCCGAAGGCGACGACAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGG > 2:416142/1‑65 GACTCCGCCGAAGGCGGAGTCAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACGGATAACGGCATCGTTGTA > 1:838964/1‑150 ACGACAGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACGGATAACGGCATCGTTGTAGCGGAAGTTGTCTTCC < 2:2376122/150‑1 AGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACGGATAACGGCATCGTTGTAGCGGAAGTTGTCTTCCAGCTC > 1:1632895/1‑150 AGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCT > 1:386827/1‑85 AGCATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCT < 2:386827/85‑1 CATGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACGGATAACGGCATCGTTGTAGCGGAAGTTGTCTTCCAGCTCGG < 2:1947991/150‑1 GTTATCCGTAACCTGGTCATCCGTCGCGACGAAGCCGTTACCGGCCAGTCCGAGATGCTGAAGGCTGAAGAGAACCGCAGCGAGCGCCGTGAGCGTCGCGAGCGTCCTGAGCATGCTGACTCCGCCGAAGGCGACGACAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5544659‑5544518‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcaTGCTCAGGACGCTCGCGACGCTCACGGCGCTCGCTGCGGTTCTCTTCAGCCTTCAGCATCTCGGACTGGCCGGTAACGGCTTCGTCGCGACGGATGACCAGGTTACGGATAACGGCATCGTTGTAGCGGAAGTTGTCTTCCAGCTCGG > NC_002947/5544547‑5544694 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |