New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5655139	79 (0.850)	6 (0.070)	6/236	NT	7.2%	coding (458/1059 nt)	epd	D‑erythrose 4‑phosphate dehydrogenase
	?	NC_002947	= 5655159	79 (0.900)					coding (438/1059 nt)	epd	D‑erythrose 4‑phosphate dehydrogenase

CAGGTCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5654985‑5655139 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaggcCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATCCACTCGGCGATGAACGACCAGCCGGTGA  <  NC_002947/5655159‑5655011                                                                                                                                                                                                                                                                                                                  CAGGTCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACAC                                                                                                                                                            <  1:1398688/150‑1  gGGTCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGTCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACC                                                                                                                                                           <  2:1785976/149‑1   GGTCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCA                                                                                                                                                          <  1:517200/150‑1    GTCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAG                                                                                                                                                         <  1:1070923/150‑1    GTCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAG                                                                                                                                                         <  2:2070836/150‑1    GTCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAG                                                                                                                                                         <  1:1951839/150‑1     TCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGG                                                                                                                                                        >  1:945132/1‑150      CTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGC                                                                                                                                                       <  2:1148352/150‑1      CTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGCTGGTGGTGCACGAGGCGTTGGACACCAGGC                                                                                                                                                       <  1:2289852/150‑1                               CGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGCCTGCCTTACCGGCAGCGAGCGCCTG                                                                                                                              <  1:99173/150‑1                                       CGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAA                                                                                                                      <  1:1057886/150‑1                                                  GAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGG                                                                                                                                                        <  1:1311323/105‑1                                                  GAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGG                                                                                                                                                        >  2:1311323/1‑105                                                       GATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGC                                                                                                                                                       <  1:1690687/101‑1                                                       GATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGC                                                                                                                                                       >  2:1690687/1‑101                                                                         ATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCA                                                                                                                                                          <  2:600174/80‑1                                                                         ATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCA                                                                                                                                                          >  1:600174/1‑80                                                                           ATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGCCTGCCTTACCGGCAGCGAGC                                                                                                                                   <  1:181279/101‑1                                                                           ATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGCCTGCCTTACCGGCAGCGAGC                                                                                                                                   >  2:181279/1‑101                                                                                                                                   GTGCACGAGGCGTTGGACACCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGT                                                                                                                            <  2:2158841/52‑1                                                                                                                                   GTGCACGAGGCGTTGGACACCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGT                                                                                                                            >  1:2158841/1‑52                                                                                                                                                     ACCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCACCGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATAT                                                <  1:167215/110‑1                                                                                                                                                     ACCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATCCACTCGGCGATGAACGACCAGC        >  1:1595957/1‑150                                                                                                                                                     ACCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATAT                                                >  2:167215/1‑110                                                                                                                                                      CCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATCCACTCGGCGATGAACGACCAGCC       >  2:2183918/1‑150                                                                                                                                                      CCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTG                                                           <  1:481902/98‑1                                                                                                                                                      CCAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTG                                                           >  2:481902/1‑98                                                                                                                                                       CAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATCCACTCGGCGATGAACGACCAGCCG      >  2:1628386/1‑150                                                                                                                                                       CAGGCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATCCACTCGGCGATGAACGACCAGCCG      >  1:1465093/1‑150                                                                                                                                                          GCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATC                              >  1:1628530/1‑123                                                                                                                                                          GCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATC                              <  2:1628530/123‑1                                                                                                                                                          GCCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCAACGAATATGTGCAGATCACAACCATCCACTCGGCGATGAACGACCAGCCGGTG   >  1:866342/1‑150                                                                                                                                                           CCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATCCACTCGGCGATGAACGACCAGCCGGTGA  <  2:941600/150‑1                                                                                                                                                                                                                                                                                                                  CAGGTCTTCGTGGTGATAGGCATCGATCACCGGCTGGTCGTTCATCGCCGAGTGGATGGTTGTGATCTGCACATATTCGATGCCAAACGCCTGGTCCAGCACACGCAGCAGCGGCACGCCGCAGTTGGTGGTGCACGAGGCGTTGGACACCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5654985‑5655139 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaggcCTGCCTTACCGGCAGCGAGCGCCTGGTGTCCAACGCCTCGTGCACCACCAACTGCGGCGTGCCGCTGCTGCGTGTGCTGGACCAGGCGTTTGGCATCGAATATGTGCAGATCACAACCATCCACTCGGCGATGAACGACCAGCCGGTGA  <  NC_002947/5655159‑5655011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.