| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5783618 | 85 (0.910) | 6 (0.070) | 5/228 | NT | 7.1% | coding (2037/3309 nt) | kefA | intermediate mechanosensitive channel protein |
| ? | NC_002947 | = 5783629 | 80 (0.940) | coding (2048/3309 nt) | kefA | intermediate mechanosensitive channel protein | |||||
CGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGGCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5783459‑5783618‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagggcggtgAACGCTACCCCCACCGCCCTGCGGAACAGCGAGGTGTCACGGTGTGCCGGGCTGCTGAGCAGCAGACGGCTGAGCAGCCAGGCCATTAGCGCATAGCAGGTCAGCACCACGCCGATGCCCAACACGTCGTCTGCCAGTGCCGAAGGCTG < NC_002947/5783629‑5783481 CGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCG > 1:1959948/1‑150 TGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGTCTTCTCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCA > 1:982769/1‑150 GTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGGCGGTG < 1:194292/150‑1 CGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGG > 1:1556676/1‑140 CGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGG < 2:1556676/140‑1 GGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGGCGGTGAACGCTACCCCCACCGCCCT < 2:2241986/150‑1 GGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGGCGGTGAACGCTACCCCCACCGCCCT < 2:1586628/150‑1 TAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGG > 1:2388362/1‑72 TAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGG < 2:2388362/72‑1 TCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGGCGGTGAACGCTACCCCCACCGCCC > 2:725595/1‑81 TCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGGCGGTGAACGCTACCCCCACCGCCC < 1:725595/81‑1 CCGTGACACCTCGCTGTTCCGCAGGGCGGTGAACGCTACCCCCACCGCC > 2:639710/1‑49 CCGTGACACCTCGCTGTTCCGCAGGGCGGTGAACGCTACCCCCACCGCC < 1:639710/49‑1 GCAGGGCGGTGAACGCTACCCCCACCGCCCTGCGGAACAGCGAGGTGTCACGGTGTGCCGGGCTGCTGAGCAGCAGACGGCTGAGCAGCCAGGCCATTAGCGCATAGCAGGTCAGCACCACGCCGATGCCCAACACGTCGTCTGCCAGTG < 2:1165748/150‑1 CAGGGCGGTGAACGCTACCCCCACCGCCCTGCGGAACAGCGAGGTGTCACGGTGTGCCGGGCTGCTGAGCAGCAGACGGCTGAGCAGCCAGGCCATTAGCGCATAGCAGGTCAGCACCACGCCGATGCCCAACACGTCGTCTGCCAGTGC < 1:99103/150‑1 AGGGCGGTGAACGCTACCCCCACCGCCCTGCGGAACAGCGAGGTGTCACGGTGTGCCGGGCTGCTGAGCAGCAGACGGCTGAGCAGCCAGGCCATTAGCGCATAGCAGGTCAGCACCACGCCGATGCCCAACACGTCGTCTGCCAGTGCC > 2:2218008/1‑150 tGCGGTTAACGCTACCCCCACCGCCCTGCGGAACAGCGAGGTGTCACGGTGTGCCGGGCTGCTGAGCAGCAGACGGCTGAGCATCCAGGCCATTAGCGCANAGCANGTCAGCACCACGCCNATGCCCAACACGTCGTCTGCCAGTGCCGA < 1:589907/149‑1 GGCGGTGAACGCTACCCCCACCGCCCTGCGTAACAGCGAGGT > 1:1638622/1‑42 GGCGGTGAACGCTACCCCCACCGCCCTGCGGAACAGCGAGGT < 2:1638622/42‑1 GGTGAACGCTACCCCCACCGCCCTGCGGAACAGCGAGGTGTCACGGTGTGCCGGGCTGCTGAGCAGCAGACGGCTGAGCAGCCAGGCCATTAGCGCATAGCAGGTCAGCACCACGCCGATGCCCAACACGTCGTCTGCCAGTGCCGAAGG < 2:1387396/150‑1 TGAACGCTACCCCCACCGCCCTGCGGAACAGCGAGGTGTCACGGTGTGCCGGGCTGCTGAGCAGCAGACGGCTGAGCAGCCAGGCCATTAGCGCATAGCAGGTCAGCACCACGCCGATGCCCAACACGTCGTCTGCCAGTGCCGAAGGCc > 2:263604/1‑149 GAACGCTACCCCCACCGCCCTGCGGAACAGCGAGGTGTCACGGTGTGCCGGGCTGCTGAGCAGCAGACGGCTGAGCAGCCAGGCCATTAGCGCATAGCAGGTCAGCACCACGCCGATGCCCAACACGTCGTCTGCCAGTGCCGAAGGCTG < 1:2423485/150‑1 GAACGCTACCCCCACCGCCCTGCGGAACAGCGAGGTGTCACGGTGTGCCGGGCTGCTGAGCAGCAGACGGCTGAGCAGCCAGGCCATTAGCGCATAGCAGGTCAGCACCACGCCGATGCCCAACACGTCGTCTGCCAGTGCCGAAGGCTG < 2:549645/150‑1 GAACGCTACCCCCACCGCCCTGCGGAACAGCGAGGTGTCACGGTGTGCCGGGCTGCTGAGCAGCAGACGGCTGAGCAGCCAGGCCATTAGCGCATAGCAGGTCAGCACCACGCCGATGCCCAACACGTCGTCTGCCAGTGCCGAAGGCTG < 1:1646898/150‑1 CGTGGTGGCGGTGGCCGAGCACCAGCCTTCGGCACTGGCAGACGACGTGTTGGGCATCGGCGTGGTGCTGACCTGCTATGCGCTAATGGCCTGGCTGCTCAGCCGTCTGCTGCTCAGCAGCCCGGCACACCGTGACACCTCGCTGTTCCGCAGGGCGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5783459‑5783618‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagggcggtgAACGCTACCCCCACCGCCCTGCGGAACAGCGAGGTGTCACGGTGTGCCGGGCTGCTGAGCAGCAGACGGCTGAGCAGCCAGGCCATTAGCGCATAGCAGGTCAGCACCACGCCGATGCCCAACACGTCGTCTGCCAGTGCCGAAGGCTG < NC_002947/5783629‑5783481 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |