| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5843194 = | 82 (0.880) | 7 (0.080) | 6/240 | NT | 8.6% | coding (266/486 nt) | PP_5121 | hypothetical protein |
| ? | NC_002947 | 5843224 = | 70 (0.780) | coding (296/486 nt) | PP_5121 | hypothetical protein | |||||
GCAGCAGTTGCAGCAACGAGGCGTGCCCCATGCGTAGCAGGTTCAGCGAGCTGTCCTGCCAGCGTTGCAGGAACGCCGTGACCTGCGTGGCGCCAGCTTGGCCCCAGCTGCCCCAGACGCCGGTCAGCGGGCCGC‑GAGTCAGCGGCAGGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5843346‑5843194‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgaCCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGTTGCTGCAACTGCTGCAAATGGCCTGGTACGAACGCCCCGAA > NC_002947/5843224‑5843372 GCAGCAGTTGCAGCAACGAGGCGTGCCCCATGCGTAGCAGGTTCAGCGAGCTGTCCTGCCAGCGTTGCAGGAACGCCGTGACCTGCGTGGCGCCAGCTTGGCCCCAGCTGCCCCAGACGCCGGTCAGCGGGCCGC‑GAGTCAGCGGCAGGC > 1:2111677/1‑150GCAGCAGTTGCAGCAACGAGGCGTGCCCCATGCGTAGCAGGTTCAGCGAGCTGTCCTGCCAGCGTTGCAGGAACGCCGTGACCTGCGTGGCGCCAGCTTGGCCCCAGCTGCCCCAGACGCCGGTCAGCGGGCCGC‑GAGTCAGCGGCAGGC > 2:1633231/1‑150 CAGCAGTTGCAGCAACGAGGCGTGCCCCATGCGTAGCAGGTTCAGCGAGCTGTCCTGCCAGCGTTGCAGGAACGCCGTGACCTGCGTGGCGCCAGCTTGGCCCCAGCTGCCACAGACGCAGGTGAGCGGGCCGC‑GAAGCAGCGGCAGGCT > 1:1108692/1‑150 GCAGTTGCAGCAACGAGGCGTGCCCCATGCGTAGCAGGTTCAGCGAGCTGTCCTGCCAGCGTTGCAGGAACGCCGTGACCTGCGTGGCGCCAGCTTGGCCCCAGCTGCCCCAGACGCCGGTCAGCGGGCCGC‑GAGTCAGCGGCAGGCTGA > 1:1469095/1‑150 AACGAGGCGTGCCCCATGCGTAGCAGGTTCAGCGAGCTGTCCTGCCAGCGTTGCAGGAACGCCGTGACCTGCGTGGCGCCAGCTTGGCCCCAGCTGCCCCAGACGCCGGTCAGCCTGCCGCTGACTC‑GCGGCCCGCTGACCGGCGTCTGG < 1:219175/150‑1 GCCGGTCAGCGGGCCGC‑GAGTCAGCGGCAGGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCGGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCA < 2:1908760/128‑1 GCCGGTCAGCGGGCCGC‑GAGTCAGCGGCAGGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCGGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCA > 1:1908760/1‑128 GCCGGTCAGCGGGCCGC‑GAGTCAGCGGCAGGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGC > 2:2109719/1‑122 GCCGGTCAGCGGGCCGC‑GAGTCAGCGGCAGGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGC < 1:2109719/122‑1 AGCGGGCCGC‑GAGTCAGCGGCAGGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGTTGCTGCAACTGCTG > 1:2439781/1‑150 GCGGGCCGC‑GAGTCAGCGGCAGGCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGTTGCTGCAACTGCTGC > 2:2099970/1‑150 GCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGTTGCTGCAACTGCTGCAAATGGCCTGGTACGAACGCCC < 1:1676011/150‑1 GCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGTTGCTGCAACTGCTGCAAATGGCCTG < 2:1545388/138‑1 GCTGACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGTTGCTGCAACTGCTGCAAATGGCCTG > 1:1545388/1‑138 GACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGTTGCTGCAACTGCTGCAAATGGCCTGGTACGAACGCCCCGA < 2:420822/150‑1 GACCGGCGTATGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGTTGCTGCAACTGCTGCAAATGGCCTGGTACGAACGCCCCGA > 2:1856865/1‑150 ACCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGTTGCTGCAACTGCTGCAAATGGCCTGGTACGAACGCCCCGAA < 1:754778/150‑1 GCAGCAGTTGCAGCAACGAGGCGTGCCCCATGCGTAGCAGGTTCAGCGAGCTGTCCTGCCAGCGTTGCAGGAACGCCGTGACCTGCGTGGCGCCAGCTTGGCCCCAGCTGCCCCAGACGCCGGTCAGCGGGCCGC‑GAGTCAGCGGCAGGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5843346‑5843194‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgaCCGGCGTCTGGGGCAGCTGGGGCCAAGCTGGCGCCACGCAGGTCACGGCGTTCCTGCAACGCTGGCAGGACAGCTCGCTGAACCTGCTACGCATGGGGCACGCCTCGTTGCTGCAACTGCTGCAAATGGCCTGGTACGAACGCCCCGAA > NC_002947/5843224‑5843372 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |