New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3400499 =100 (1.070)5 (0.060) 4/242 NT 5.4% coding (114/549 nt) PP_3006 ECF family RNA polymerase sigma‑70 factor
?NC_002947 3400544 = 80 (0.890)coding (69/549 nt) PP_3006 ECF family RNA polymerase sigma‑70 factor

Only 100 of 108 total aligned reads displayed.

CGCCAGGTGGCGGGTAATGCTGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCC  >  NC_002947/3400352‑3400645
                                                                                                                                                   |                                                                                                                                                  
cgcCAGGTGGCGGGTAATGCTGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATAGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGcc                                                                                                                                                  >  1:673522/1‑150 (MQ=255)
  ccAGGTGGCGGGTAATGCTGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCca                                                                                                                                                >  1:2314868/1‑150 (MQ=255)
           gggTAATGCTGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGgcgcg                                                                                                                                       >  2:689005/1‑150 (MQ=255)
           gggTAATAATGTGGATCCAGCCTCGAGCCGATCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGAATAGTACAAGACGTGCACTTTTGCTGCGCCGTCACGTGCGATTCGCCGGGCAACGCCCAGCAGgcgcg                                                                                                                                       >  2:2366804/1‑150 (MQ=255)
            ggTAATGCTGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGgcgcgc                                                                                                                                      >  2:1971513/1‑150 (MQ=255)
             gTAGTGCTGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCGGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCGTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGgcgcgcg                                                                                                                                     <  1:26990/150‑1 (MQ=255)
                  gCTGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTc                                                                                                                                <  2:2314868/150‑1 (MQ=255)
                    tGTAGATCCAGCCTCGAGCCGAGCCGGGCGCCGGGTCGTAGCTGGCTGGGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGGGGCGTCGGCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGt                                                                                                                              <  2:359160/150‑1 (MQ=255)
                    tGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGt                                                                                                                              <  1:689005/150‑1 (MQ=255)
                    tGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGt                                                                                                                              >  2:810819/1‑150 (MQ=255)
                    tGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGt                                                                                                                              <  2:742690/150‑1 (MQ=255)
                       aGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGAt                                                                                                                           <  1:2209839/150‑1 (MQ=255)
                        gATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATc                                                                                                                          <  1:855936/150‑1 (MQ=255)
                        gATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATc                                                                                                                          <  1:1549096/150‑1 (MQ=255)
                          tCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGt                                                                                                                        >  2:2211842/1‑150 (MQ=255)
                               ccTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAgc                                                                                                                   >  1:1675038/1‑150 (MQ=255)
                               ccTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCGTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCTCCTTCGTGATCGTAGAgc                                                                                                                   >  2:1661108/1‑150 (MQ=255)
                                 tCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAgcgc                                                                                                                 >  2:1621448/1‑150 (MQ=255)
                                  cgagccgagcCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATAGCATCGTTGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGcc                                                                                                                <  2:673522/150‑1 (MQ=255)
                                   gagccgagccGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCt                                                                                                               <  2:58244/150‑1 (MQ=255)
                                    agccgagccgCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTg                                                                                                              <  2:418990/150‑1 (MQ=255)
                                      ccgagccgCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCa                                                                                                            <  2:1480762/150‑1 (MQ=255)
                                      ccgagccgCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCa                                                                                                            <  2:1479805/150‑1 (MQ=255)
                                       tggccggggtacttgccttacacaaggaagctacacacgttgaactcgcctgccgcccccttcgacttccaccgctgcctgttagcctgtgcacagggtgaccgacggGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAg                                                                                                           >  2:1249817‑M1/109‑150 (MQ=255)
                                       tggccggggtacttgccttacacaaggaagccacacacgttgaactcgccggccgcccccttcgacttccaccgctgcctgttggcctgtgcacagggtgaccgacggGCCCTGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAg                                                                                                           >  1:848538‑M1/109‑150 (MQ=255)
                                       cgagccgCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAg                                                                                                           <  1:2211842/150‑1 (MQ=255)
                                        gagccgCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGCGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAgg                                                                                                          <  2:1054539/150‑1 (MQ=255)
                                        gagccgCGCGCCGGGTCGTAGCTGGCGGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAgg                                                                                                          <  2:285815/150‑1 (MQ=255)
                                          ccggggtacttgccttacacaaggaagccacacacgttgaactcgccggccgcccccttcgacttccaccgctgcctgttagcctgtgcacagggtgaccgacggGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGc                                                                                                        >  1:1541256‑M1/106‑150 (MQ=255)
                                           ccgCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGcc                                                                                                       >  2:1997907/1‑150 (MQ=255)
                                             gcgcgcCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCg                                                                                                     >  1:1517506/1‑150 (MQ=255)
                                                   cGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTc                                                                                               >  2:1109392/1‑150 (MQ=255)
                                                    gggTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTct                                                                                              <  2:2078182/150‑2 (MQ=255)
                                                          tAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCtgt                                                                                        <  1:2353280/150‑1 (MQ=255)
                                                              tggctgCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGcac                                                                                    <  1:2366804/150‑1 (MQ=255)
                                                                 ctgCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAgg                                                                                 <  2:1575074/150‑1 (MQ=255)
                                                                  tgCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAg                                                                                  >  2:1785307/1‑148 (MQ=255)
                                                                  tgCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAg                                                                                  <  1:1785307/148‑1 (MQ=255)
                                                                  tgCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGc                                                                                <  2:1675038/150‑1 (MQ=255)
                                                                  tgCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGc                                                                                >  1:70955/1‑150 (MQ=255)
                                                                  tgCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGc                                                                                >  2:159467/1‑150 (MQ=255)
                                                                     gcgGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTaa                                                                             >  1:1620171/1‑150 (MQ=255)
                                                                         gTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAgcgc                                                                                                                 >  1:1517071/1‑110 (MQ=255)
                                                                            cAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAg                                                                      >  2:1141755/1‑150 (MQ=255)
                                                                            cAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCACGAAGGCGCGCGCCTTCGTGATCGTAGAGCGCCAGAAGGGCCCTGCGGTCACCCTGTGCACAGGCTAACAGGCAg                                                                      >  1:1114312/1‑150 (MQ=255)
                                                                             aGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGc                                                                     >  2:703767/1‑150 (MQ=255)
                                                                             aGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGc                                                                     >  1:2438915/1‑150 (MQ=255)
                                                                              gATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCg                                                                    >  2:65531/1‑150 (MQ=255)
                                                                               aTGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCgg                                                                   >  2:1772029/1‑150 (MQ=255)
                                                                                tGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCTCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGt                                                                  <  1:1661108/150‑1 (MQ=255)
                                                                                tGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGcc                                                                                                                >  1:1340588/1‑104 (MQ=255)
                                                                                tGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGcc                                                                                                                <  2:1340588/104‑1 (MQ=255)
                                                                                tGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGt                                                                  <  2:1862003/150‑1 (MQ=255)
                                                                                 gCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTg                                                                 <  2:1933408/150‑1 (MQ=255)
                                                                                 gCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTg                                                                 <  2:2438915/150‑1 (MQ=255)
                                                                                  actcgccggccgcccccttcgacttccaccgctgcctgttagcctgtgcacagggtgaccgacggGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCt                                                                                                               <  2:573777‑M1/38‑1 (MQ=255)
                                                                                  actcgccggccgcccccttcgacttccaccgctgcctgttagcctgtgcacagggtgaccgacggGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCt                                                                                                               >  1:573777‑M1/66‑103 (MQ=255)
                                                                                    gatgatCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGaa                                                              >  1:1519152/1‑150 (MQ=255)
                                                                                      tgatCGCATCGTGGACGATGGCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGAACTGCGCACGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGt                                                            <  1:1971513/150‑1 (MQ=255)
                                                                                         tCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGa                                                         >  1:1362828/1‑150 (MQ=255)
                                                                                         tCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGa                                                         >  1:835839/1‑150 (MQ=255)
                                                                                           gCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAg                                                       >  1:96585/1‑150 (MQ=255)
                                                                                           gCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAg                                                       <  1:1094137/150‑1 (MQ=255)
                                                                                            cATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAgg                                                      <  1:2443493/150‑1 (MQ=255)
                                                                                             aTCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAggg                                                     >  1:1933561/1‑150 (MQ=255)
                                                                                               cGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAggggg                                                   <  1:159467/150‑1 (MQ=255)
                                                                                                      gATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCATCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGcggccgg                                            >  1:1255483/1‑150 (MQ=255)
                                                                                                      gATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCATCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGcggccgg                                            >  1:1255319/1‑150 (MQ=255)
                                                                                                       aTGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGcggccggc                                           >  1:240610/1‑150 (MQ=255)
                                                                                                         gTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGa                                         <  1:844832/150‑1 (MQ=255)
                                                                                                          tcttctGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGa                                                               >  2:1886736/1‑127 (MQ=255)
                                                                                                          tcttctGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGa                                                               <  1:1886736/127‑1 (MQ=255)
                                                                                                           cttctGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCATCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGt                                       <  2:1255483/150‑1 (MQ=255)
                                                                                                           cttctGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCATCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGt                                       <  2:1255319/150‑1 (MQ=255)
                                                                                                            ttctGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGc                                                                                >  2:1819657/1‑108 (MQ=255)
                                                                                                            ttctGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGc                                                                                <  1:1819657/108‑1 (MQ=255)
                                                                                                            ttctGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGGAGTCGAAGGGGGCGGCCGGCGAgat                                      >  1:506765/1‑148 (MQ=255)
                                                                                                            ttctGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGTGGCCGGCGAGtt                                      >  1:1169367/1‑150 (MQ=255)
                                                                                                            ttctGCGGTGGCGTAGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGtt                                      >  1:921302/1‑150 (MQ=255)
                                                                                                                gCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAAc                                  <  2:955099/150‑1 (MQ=255)
                                                                                                                  ggTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACgt                                <  1:703767/150‑1 (MQ=255)
                                                                                                                      gCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACgtgtgt                            >  2:219456/1‑150 (MQ=255)
                                                                                                                       cgtcgtCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGtgtgtg                           <  2:1620171/150‑1 (MQ=255)
                                                                                                                       cgtcgtCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGtgtgtg                           <  1:1997907/150‑1 (MQ=255)
                                                                                                                        gtcgtcACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCt                                                                                          <  2:2054424/86‑1 (MQ=255)
                                                                                                                        gtcgtcACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCt                                                                                          >  1:2054424/1‑86 (MQ=255)
                                                                                                                        gtcgtcACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTgg                          >  2:2398834/1‑150 (MQ=255)
                                                                                                                           gtcACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCtt                       >  2:482021/1‑150 (MQ=255)
                                                                                                                              aCGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACgtgtgt                            <  2:819879/142‑1 (MQ=255)
                                                                                                                              aCGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACgtgtgt                            >  1:819879/1‑142 (MQ=255)
                                                                                                                               cGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTATTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCtt                   <  1:1592812/150‑1 (MQ=255)
                                                                                                                                gTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGa                                         <  2:1370407/127‑1 (MQ=255)
                                                                                                                                gTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGa                                         >  1:1370407/1‑127 (MQ=255)
                                                                                                                                gTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTtg                  >  1:864739/1‑150 (MQ=255)
                                                                                                                                     aTACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTaa             <  2:1981681/150‑1 (MQ=255)
                                                                                                                                     aTACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCAGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTaa             >  1:122863/1‑150 (MQ=255)
                                                                                                                                      tACGCCGGGCAACGCGCAGCAGGGGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAg            <  1:963329/150‑1 (MQ=255)
                                                                                                                                      tACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAg            <  2:1362828/150‑1 (MQ=255)
                                                                                                                                          ccGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCaa        <  1:858006/150‑1 (MQ=255)
                                                                                                                                                aaCGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTAccc  <  1:1772029/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CGCCAGGTGGCGGGTAATGCTGTAGATCCAGCCTCGAGCCGAGCCGCGCGCCGGGTCGTAGCTGGCTGCGCGGGTCCAGATGCGGATGATCGCATCGTGGACGATGTCTTCTGCGGTGGCGTCGTCACGTGCGATACGCCGGGCAACGCCCAGCAGGCGCGCGCCTTCGTGATCGTAGAGCGCCTGCAGGGCCCGTCGGTCACCCTGTGCACAGGCTAACAGGCAGCGGTGGAAGTCGAAGGGGGCGGCCGGCGAGTTCAACGTGTGTGGCTTCCTTGTGTAAGGCAAGTACCC  >  NC_002947/3400352‑3400645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.