New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3963855 =	68 (0.730)	5 (0.060)	5/240	NT	6.6%	coding (193/933 nt)	PP_3493	LysR family transcriptional regulator
	?	NC_002947	3963900 =	76 (0.850)					coding (148/933 nt)	PP_3493	LysR family transcriptional regulator

TGTAGCCGGCCACCAGCGGCATCAGCAACAGCCCCATGCCGTGCGGGCAGTGCAAACGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCAGAGCATTGGCAGCTGCAGCGAAGCTGCCACATT  >  NC_002947/3963708‑3964004                                                                                                                                                     |                                                                                                                                                       atggcatgcagcatgtccatgcgtaccttcacccgggtggtggaatgtggcagcttcgctgcagctgccaatgctctggatatttctgcagcgcaggtttcgcgcatcgtcgccgagctggagaaccagctgcagacccgcctgctgcAc                                                                                                                                                       <  2:1829542‑M1/2‑1 (MQ=255) atggacatgctgcatgccatgcgtaccttcacccgggtggtggaatgtggcagcttcgctgcagctgccaatgctctggatatttctgcagcgcaggtttcgcgcatcgtcgccgagctggagaaccagctgcagacccgcctgctgcAc                                                                                                                                                       >  2:55600‑M1/149‑150 (MQ=255)  gtAGCCGGCCACCAGCGGCATCAGCAACAGCCCCATGCCGTGCGGGCAGTGCAAACGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCg                                                                                                                                                     >  2:1899575/1‑150 (MQ=255)  gtAGCCGGCCACCAGCGGCATCAGCAACAGCCCCATGCCGTGCGGGCAGTGCAAACGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTAGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCg                                                                                                                                                     <  2:1576059/150‑1 (MQ=255)   tAGCCGGCCACCAGCGGCATCAGCAACAGCCCCATGCCGTGCGGGCAGTGCAAACGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCATAAACCGc                                                                                                                                                    >  1:824835/1‑150 (MQ=255)      ccGGCCACCAGCGGCATCAGCAACAGCCCCATGCCGAGCGGGCAGTGCAAACGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCCCCGCCCCTTCGGTCCGCAGCCTCATCTGCCGCGTATG‑CTCCATAAACCGCTC‑a                                                                                                                                                <  2:1728497/150‑1 (MQ=255)       cGGCCACCAGCGGCATCAGCAACAGCCCCATGCCGTGCGGGCAGTGCAAACGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑Ac                                                                                                                                               >  1:396184/1‑150 (MQ=255)                      tCAGCATCAGCCCCATGCCGTGCGGGCAGTGCAAACGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATgc                                                                                                                                <  1:804732/150‑1 (MQ=255)                      tCAGCAACAGCCCCATGCCGTGCGGGCAGTGCAAACGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATgc                                                                                                                                >  1:423068/1‑150 (MQ=255)                        aGCAACAGCCCCATGCCGTGCGGGCAGTGCAAACGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATgcgc                                                                                                                              >  1:1334830/1‑150 (MQ=255)                                   cATGCCGTGCGGGCAGTGCAAACGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGggt                                                                                                                   >  2:481721/1‑150 (MQ=255)                                    aTGCCGTGCGGGCAGTGCAAACGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGggtg                                                                                                                  >  1:2105469/1‑150 (MQ=255)                                     gtggtggaatgtggcagcttcgctgcagctgccaatgctctggatatttctgcagcgcaggtttcgcgcatcgtcgccgagctggagaaccagctgcagacccgcctgctgcACCGCACCACCCGCCTCGCTCATGCGCAGGCGCCGggt                                                                                                                   >  1:850203‑M1/113‑150 (MQ=255)                                      gCCGTGCGGGCAGTGCAAACGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGC‑TACGACGCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGggtggt                                                                                                                <  1:2274910/150‑1 (MQ=255)                                        cGTGCGGGCAGTGCAAACGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTggtgc                                                                                                              <  1:27301/150‑1 (MQ=255)                                         tggaatgtggcagcttcgctgcagctgccaatgctctggatatttctgcagcgcaggtttcgcgcatcgtcgccgagctggagaaccagctgcagacccgcctgctgcACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGggtggt                                                                                                                <  2:406782‑M1/40‑1 (MQ=255)                                         tggaatgtggcagcttcgctgcagctgccaatgctctggatatttctgcagcgcaggtttcgcgcatcgtcgccgagctggagaaccagctgcagacccgcctgctgcACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGggtggt                                                                                                                >  1:406782‑M1/109‑148 (MQ=255)                                          ggaatgtggcagcttcgctgcagctgccaatgctctggatatttctgcagcgcaggtttcgcgcatcgtcgccgagctggagaaccagctgcagacccgcctgctgcACCGCACCACCCGCCTCGCTCATGCGCAGGCGCCGGGTggtgc                                                                                                              >  2:157181‑M1/108‑150 (MQ=255)                                           gaatgtggcagcttcgctgcagctgccaatgctctggatatttctgcagcgcaggtttcgcgcatcgtcgccgagctggagaaccagctgcagacccgcctgctgcACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTggtgcgg                                                                                                            >  2:1522389‑M1/107‑150 (MQ=255)                                              ggCAGTGCAAACGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCCGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTgca                                                                                                        <  1:1345612/150‑1 (MQ=255)                                              ggCAGTGCAAACGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTgca                                                                                                        <  2:1792362/150‑1 (MQ=255)                                                      aaaCGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCgg                                                                                                <  2:1443831/150‑1 (MQ=255)                                                      aaaCGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCgg                                                                                                <  1:1837660/150‑1 (MQ=255)                                                      aaaCGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCgg                                                                                                <  2:796457/150‑1 (MQ=255)                                                      aaaCGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCAACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCgg                                                                                                <  1:2365681/150‑1 (MQ=255)                                                       aaCGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGggtg                                                                                                                  >  1:1626838/1‑131 (MQ=255)                                                       aaCGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGggtg                                                                                                                  <  2:1626838/131‑1 (MQ=255)                                                        aCGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGt                                                                                              >  1:1734508/1‑150 (MQ=255)                                                                     cgAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCTGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTtc                                                                                 <  1:156564/150‑1 (MQ=255)                                                                      gAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGAGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTtct                                                                                >  1:1829542/1‑150 (MQ=255)                                                                       aGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTtctc                                                                               <  2:549797/150‑1 (MQ=255)                                                                           gTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGc                                                                           >  1:910586/1‑150 (MQ=255)                                                                           gTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGc                                                                           <  2:423068/150‑1 (MQ=255)                                                                            tAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCt                                                                          >  2:112264/1‑150 (MQ=255)                                                                                        cTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATgc                                                              <  2:2261738/150‑1 (MQ=255)                                                                                        cTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATgc                                                              >  2:2406242/1‑150 (MQ=255)                                                                                        cTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATACGCCGCGCACC‑CGCCAGAATCCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATgc                                                              <  1:2380281/150‑1 (MQ=255)                                                                                          cgcgCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCATAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATgcgc                                                            <  2:824835/150‑1 (MQ=255)                                                                                          cgcgCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATgcgc                                                            <  2:1334830/150‑1 (MQ=255)                                                                                          cgcgCCTCGCCCACGGCTTCTGCGGTCAGCAGCATGATCTGCCGCTCACG‑CTCCAGAATCCGCTC‑ACCCGCCTCGCTCATGCTCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATgcgc                                                            <  2:1181132/150‑1 (MQ=255)                                                                                           gcgcCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGggtg                                                                                                                  >  1:2049075/1‑95 (MQ=255)                                                                                           gcgcCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGggtg                                                                                                                  <  2:2049075/95‑1 (MQ=255)                                                                                               cTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATg                                                                                                                                 <  2:1215192/76‑1 (MQ=255)                                                                                               cTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATg                                                                                                                                 >  1:1215192/1‑76 (MQ=255)                                                                                               cTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAAc                                                       >  1:1528793/1‑150 (MQ=255)                                                                                                   cccACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCCGCTCGGCGACGACGCGCCACACCTgc                                                   >  2:136247/1‑150 (MQ=255)                                                                                                    ccACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTgcg                                                  >  1:1601/1‑150 (MQ=255)                                                                                                    ccACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTgcg                                                  >  2:406511/1‑150 (MQ=255)                                                                                                      aCGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTgg                                                                                    <  1:2451458/114‑1 (MQ=255)                                                                                                      aCGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTgg                                                                                    >  2:2451458/1‑114 (MQ=255)                                                                                                      aCGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATgcgc                                                            >  1:1466428/1‑138 (MQ=255)                                                                                                      aCGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATgcgc                                                            <  2:1466428/138‑1 (MQ=255)                                                                                                         gCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCa                                             <  2:543072/150‑1 (MQ=255)                                                                                                         gCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCa                                             <  1:481721/150‑1 (MQ=255)                                                                                                              ttcGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCgg                                                                                                >  2:358440/1‑94 (MQ=255)                                                                                                              ttcGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCgg                                                                                                <  1:358440/94‑1 (MQ=255)                                                                                                              ttcGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAat                                        >  1:2386112/1‑150 (MQ=255)                                                                                                                 ggTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATc                                     <  1:2406242/150‑1 (MQ=255)                                                                                                                  gTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATcc                                    <  1:1251962/150‑1 (MQ=255)                                                                                                                  gTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATcc                                    <  1:406511/150‑1 (MQ=255)                                                                                                                   tCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCa                                   >  2:1733697/1‑150 (MQ=255)                                                                                                                      gcagcaTGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGaaa                                                        <  1:2095261/126‑1 (MQ=255)                                                                                                                      gcagcaTGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGaaa                                                        >  2:2095261/1‑126 (MQ=255)                                                                                                                      gcagcaTGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGaaa                                                        >  2:2095293/1‑126 (MQ=255)                                                                                                                      gcagcaTGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGaaa                                                        <  1:2095293/126‑1 (MQ=255)                                                                                                                      gcagcaTGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCa                                   >  1:162495/1‑147 (MQ=255)                                                                                                                      gcagcaTGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCa                                   <  2:162495/147‑1 (MQ=255)                                                                                                                       cagcaTGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCAGAGc                               >  2:2113859/1‑150 (MQ=255)                                                                                                                          caTGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCAGAGCAtt                            <  1:1657667/150‑1 (MQ=255)                                                                                                                          caTGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGCTCCGCCAGCGCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCAGAGCAtt                            <  2:333792/150‑1 (MQ=255)                                                                                                                                cTGCCGCGCACG‑CTCCAGACACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCAGAGCATTGGCAGc                      <  1:112264/150‑1 (MQ=255)                                                                                                                                 tGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATgc                                                              >  2:1977576/1‑109 (MQ=255)                                                                                                                                 tGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATgc                                                              <  1:1977576/109‑1 (MQ=255)                                                                                                                                 tGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCAGAGCATTGGCAGCt                     >  2:1996667/1‑150 (MQ=255)                                                                                                                                         aCG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCAGAGCATTGGCAGCTGCAGCGaa             <  2:1528793/150‑1 (MQ=255)                                                                                                                                           g‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCAGAGCATTGGCAGCTGCAGCGaa             <  1:1812896/148‑1 (MQ=255)                                                                                                                                           g‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCAGAGCATTGGCAGCTGCAGCGaa             >  2:1812896/1‑148 (MQ=255)                                                                                                                                           g‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCAGAGCATTGGCAGCTGCAGCGAAGc           >  1:1481708/1‑150 (MQ=255)                                                                                                                                                cAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCAGAGCATTGGCAGCTGCAGCGAAGCTGcc       >  1:2451972/1‑150 (MQ=255)                                                                                                                                                cAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCAGAGCATTGGCAGCTGCAGCGAAGCTGcc       >  2:1455082/1‑150 (MQ=255)                                                                                                                                                 aGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCAGAGCATTGGCAGCTGCAGCGAAGCTGCca      >  2:195443/1‑150 (MQ=255)                                                                                                                                                     ACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCAGAGCATTGGCAGCTGCAGCGAAGCTGCCACAtt  <  2:429579‑M1/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                       TGTAGCCGGCCACCAGCGGCATCAGCAACAGCCCCATGCCGTGCGGGCAGTGCAAACGCAGATGGCCGCGAGGCGTAAGGTGCGCCCCTCGCGCCTCGCCCACGGCTTCTTCGGTCAGCAGCATGATCTGCCGCGCACG‑CTCCAGAAACCGCTC‑ACCCGCCTCGCTCATGCGCAGGCGCCGGGTGGTGCGGTGCAGCAGGCGGGTCTGCAGCTGGTTCTCCAGCTCGGCGACGATGCGCGAAACCTGCGCTGCAGAAATATCCAGAGCATTGGCAGCTGCAGCGAAGCTGCCACATT  >  NC_002947/3963708‑3964004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.