New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4039437 =85 (0.910)10 (0.110) 7/236 NT 11.8% coding (250/864 nt) PP_3560 LysR family transcriptional regulator
?NC_002947 4039462 = 69 (0.780)coding (275/864 nt) PP_3560 LysR family transcriptional regulator

Only 100 of 105 total aligned reads displayed.

GCACATCAAAACCCTCGAAGACGAACTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCG  >  NC_002947/4039289‑4039585
                                                                                                                                                    |                                                                                                                                                      
tcgagctcaccgtcttccacgcgccgcgccagctccgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaaa                                                                                                                                                       <  2:1767606‑M1/2‑2 (MQ=255)
 cacaTCAAAACCCTCGAAGACGAACTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTCCTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGc                                                                                                                                                      <  1:2369366/150‑1 (MQ=255)
  gagctcaccgtcttccacgcgccgcgccagctccgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatccacaccagcgcctttggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaAGCg                                                                                                                                                     >  2:1863367‑M1/147‑150 (MQ=255)
  gagctcaccgtcttccacgcgccgcgccagctccgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaAGCg                                                                                                                                                     <  2:1594797‑M1/4‑1 (MQ=255)
   agctcaccgtcttccacgcgccgcgccagctccgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatacacaccagcgcattgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaAGCgg                                                                                                                                                    <  1:2366842‑M1/5‑1 (MQ=255)
    aTCAAAACCCTCGAAGACGAACTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGc                                                                                                                                                   >  2:2390070/1‑150 (MQ=255)
    aTCAAAACCCTCGAAGACGAACTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGACGGTGCCCTGGCGAGCGGc                                                                                                                                                   >  2:1878258/1‑150 (MQ=255)
      cAAAACCCTCGAAGACGAACTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAGAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGccg                                                                                                                                                 <  1:2390070/150‑2 (MQ=255)
        aaaCCCTCGAAGACGAACTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGTCGGTGGCCCCCCCCGAAAGGCGTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCaa                                                                                                                                               <  1:2124298/150‑1 (MQ=255)
         aaCCCTCGAAGACGAACTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAg                                                                                                                                              <  1:9968/150‑1 (MQ=255)
          aCCCTCGAAGACGAACTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGc                                                                                                                                             <  1:1916575/150‑1 (MQ=255)
           cccTCGAAGACGAACTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCaa                                                                                                                                               >  1:1476639/1‑147 (MQ=255)
           cccTCGAAGACGAACTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCaa                                                                                                                                               <  2:1476639/147‑1 (MQ=255)
              tCGAAGACGAACTGAAGGTGACCTTGTTCGACCGTATCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTgc                                                                                                                                         >  1:2150242/1‑150 (MQ=255)
              tCGAAGACGAACTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACGGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTgc                                                                                                                                         >  2:1902123/1‑150 (MQ=255)
                   cgcgccgcgccagctccgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaAGCGGCCCAAGCCTGCGCGGc                                                                                                                                    >  1:2323677‑M1/130‑150 (MQ=255)
                     agAACTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCg                                                                                                                                  <  1:404330/149‑1 (MQ=255)
                        cgcgccagctccgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaAGCGGCCCAAGCCTGCGCGGCCGCtt                                                                                                                               >  1:1594797‑M1/125‑150 (MQ=255)
                        cgcgccagctccgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccacaatcttgttgatcgcccccaggcgcaAGCGGCCCAAGCCTGCGCGGCCGCtt                                                                                                                               >  1:2275294‑M1/125‑150 (MQ=255)
                        aCTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCtt                                                                                                                               <  2:359480/150‑1 (MQ=255)
                         cggAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCAGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTg                                                                                                                              <  2:377135/148‑1 (MQ=255)
                         cTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGc                                                                                                                                    <  1:1097137/144‑1 (MQ=255)
                         cTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGc                                                                                                                                    >  2:1097137/1‑144 (MQ=255)
                              ggTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCt                                                                                                                         <  1:629213/150‑1 (MQ=255)
                               gctccgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgccAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTg                                                                                                                        >  2:1554328‑M1/118‑150 (MQ=255)
                               gTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTg                                                                                                                        <  1:631431/150‑1 (MQ=255)
                                 tccgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTggg                                                                                                                      <  2:183478‑M1/35‑1 (MQ=255)
                                 ctccgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgccccctggccaGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTgggg                                                                                                                     >  2:2055030‑M1/116‑150 (MQ=255)
                                  aCCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTgggg                                                                                                                     <  1:1502613/150‑1 (MQ=255)
                                   cgccgacatgcccgaggccacgctgatgtgtagctgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTggggg                                                                                                                    >  1:183478‑M1/114‑150 (MQ=255)
                                   ccTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTgggat                                                                                                                    <  1:1902123/150‑3 (MQ=255)
                                    cTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGc                                                                                                                                             >  2:245331/1‑124 (MQ=255)
                                    cTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGc                                                                                                                                             <  1:245331/124‑1 (MQ=255)
                                     ttGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTgcgc                                                                                                                                       >  1:2184778/1‑129 (MQ=255)
                                     ttGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTgcgc                                                                                                                                       <  2:2184778/129‑1 (MQ=255)
                                       gTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGAt                                                                                                                <  1:130262/150‑1 (MQ=255)
                                            aCCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCcaca                                                                                                           >  1:1936773/1‑150 (MQ=255)
                                             ccGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCacac                                                                                                          >  1:1640553/1‑150 (MQ=255)
                                                 aGCCGCGGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCACGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTg                                                                                                     <  1:790459/150‑1 (MQ=255)
                                                 aGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTg                                                                                                     <  1:571582/150‑1 (MQ=255)
                                                     gcaggcagGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTgg                                                                                                 <  2:2150242/150‑1 (MQ=255)
                                                      caggcaggTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCca                                                                                                             >  1:1169642/1‑138 (MQ=255)
                                                      caggcaggTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCca                                                                                                             <  2:1169642/138‑1 (MQ=255)
                                                           aggTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCgcggc                                                                                          <  1:1135188/150‑1 (MQ=255)
                                                                  aCTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGcc                                                                                   <  2:592711/150‑1 (MQ=255)
                                                                     tgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaAGCGGc                                                                                                                                                   <  1:1188010‑M1/6‑1 (MQ=255)
                                                                     tgcgggtgatgggccttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaAGCGGc                                                                                                                                                   >  2:1188010‑M1/80‑85 (MQ=255)
                                                                      aCCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAg                                                                               <  1:1187080/150‑1 (MQ=255)
                                                                      aCCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAg                                                                               >  2:464585/1‑150 (MQ=255)
                                                                        cGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGgc                                                                             >  2:2035808/1‑150 (MQ=255)
                                                                         gAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCGATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGgcg                                                                            >  1:1966324/1‑150 (MQ=255)
                                                                            gCTGGCCAGTTGGCGGTGGCCCGCGCCGAACGCCTTCTGGCTGCCTATGACGAACGGGCCGATGCCCTGGCCAGCGGCGCAAGCCTGCGCGGCGGCTTGGGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTg                                                                         <  2:820899/150‑1 (MQ=255)
                                                                             cTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTgg                                                                        >  2:1741749/1‑150 (MQ=255)
                                                                             cTGGCCAGTGGGCGGTGGCCCGCGCCGAAAGCCTCCTGGCTGCCTATGACGAACTGGCCGATGCCCGGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTgg                                                                        <  2:1710774/150‑1 (MQ=255)
                                                                              tGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGACAGGTCGTTTCCCAAGGCGCTGgt                                                                       >  1:722763/1‑150 (MQ=255)
                                                                              tGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGgt                                                                       >  1:193865/1‑150 (MQ=255)
                                                                                gCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCGTATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGgtgt                                                                     >  1:1995728/1‑150 (MQ=255)
                                                                                gCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGgtgt                                                                     >  1:61011/1‑150 (MQ=255)
                                                                                gCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGgtgt                                                                     <  1:336987/150‑1 (MQ=255)
                                                                                 ccAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTtgtgtg                                                                    <  1:12065/150‑1 (MQ=255)
                                                                                  cAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTgg                                                                   >  2:59751/1‑150 (MQ=255)
                                                                                    ttgatccacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaAGCGGCCCAAGCCTGCGCGGCCGCtt                                                                                                                               <  1:2039502‑M1/26‑1 (MQ=255)
                                                                                     ttGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCt                                                                                                   >  2:1888433/1‑116 (MQ=255)
                                                                                          ggTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGc                                                           >  1:294153/1‑150 (MQ=255)
                                                                                          cacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaa                                                                                                                                                        <  2:2213216‑M1/1‑1 (MQ=255)
                                                                                          cacaccagcgccttgggcaaacgccgcgccagcaccgtgtggatcgcccccaggcgcaa                                                                                                                                                        >  1:2213216‑M1/59‑59 (MQ=255)
                                                                                           gTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCATGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGcc                                                          >  2:722782/1‑150 (MQ=255)
                                                                                             ggCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCa                                                        <  1:1590027/150‑1 (MQ=255)
                                                                                                ccGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCa                                                     >  2:267956/1‑150 (MQ=255)
                                                                                                  gcgcCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGTGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCAcc                                                   >  1:1231904/1‑150 (MQ=255)
                                                                                                     ccGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCCTGGACCCTCACCCGc                                                >  2:1357783/1‑150 (MQ=255)
                                                                                                      cGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCa                                               >  1:1859973/1‑150 (MQ=255)
                                                                                                        aaaGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTg                                                                         <  1:911782/122‑1 (MQ=255)
                                                                                                        aaaGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTg                                                                         >  2:911782/1‑122 (MQ=255)
                                                                                                        aaaGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGtgtg                                                                    >  2:2129494/1‑127 (MQ=255)
                                                                                                        aaaGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGtgtg                                                                    <  1:2129494/127‑1 (MQ=255)
                                                                                                        aaaGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGc                                             >  2:1348879/1‑150 (MQ=255)
                                                                                                          aGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTa                                           <  1:1497826/150‑1 (MQ=255)
                                                                                                             cTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTacac                                        <  2:2121581/150‑1 (MQ=255)
                                                                                                              ttCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTAcaca                                       >  1:332098/1‑150 (MQ=255)
                                                                                                                cTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATc                                     <  2:193865/150‑1 (MQ=255)
                                                                                                                 tGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCa                                    >  1:759152/1‑150 (MQ=255)
                                                                                                                  ggCTGCCTATGACGCACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAg                                   <  1:492456/150‑1 (MQ=255)
                                                                                                                   gCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGCTCCACCCGGTTGATGGCCGGCGGTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGc                                  >  1:1750065/1‑150 (MQ=255)
                                                                                                                     tGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCaa                                                                                >  1:737836/1‑102 (MQ=255)
                                                                                                                     tGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCaa                                                                                <  2:737836/102‑1 (MQ=255)
                                                                                                                       ccTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTgg                              <  2:1859973/150‑1 (MQ=255)
                                                                                                                        cTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTg                               <  1:1895894/148‑1 (MQ=255)
                                                                                                                        cTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTg                               >  2:1895894/1‑148 (MQ=255)
                                                                                                                           tGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTg                                                                         <  2:1808141/103‑1 (MQ=255)
                                                                                                                           tGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTg                                                                         >  1:1808141/1‑103 (MQ=255)
                                                                                                                               gAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGc                      >  1:833024/1‑150 (MQ=255)
                                                                                                                                  cTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGc                                                <  1:1745080/121‑1 (MQ=255)
                                                                                                                                  cTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGc                                                >  2:1745080/1‑121 (MQ=255)
                                                                                                                                   tGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGcc                                                          >  2:693396/1‑110 (MQ=255)
                                                                                                                                   tGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGcc                                                          <  1:693396/110‑1 (MQ=255)
                                                                                                                                     gCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTcg                >  2:1906524/1‑150 (MQ=255)
                                                                                                                                       cGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTcggc              <  1:2397424/150‑1 (MQ=255)
                                                                                                                                             ccTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCt        >  1:1806547/1‑150 (MQ=255)
                                                                                                                                                   cAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTggcgcg  >  2:2245201/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                      
GCACATCAAAACCCTCGAAGACGAACTGAAGGTGACCTTGTTCGACCGTAGCCGCAGGCAGGTGGTACTGACCGAAGCTGGCCAGTTGGCGGTGGCCCGCGCCGAAAGCCTTCTGGCTGCCTATGACGAACTGGCCGATGCCCTGGCCAGCGGCCCAAGCCTGCGCGGCCGCTTGCGCCTGGGGGCGATCCACACGGTGCTGGCGCGGCGTTTGCCCAAGGCGCTGGTGTGGATCAAGGCCCATCACCCGCAGCTACACATCAGCGTGGCCTCGGGCATGTCGGCGGAGCTGGCGCG  >  NC_002947/4039289‑4039585

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.