New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5356226 =	66 (0.710)	5 (0.060)	5/234	NT	7.2%	intergenic (‑75/+42)	rbfA/infB	ribosome‑binding factor A/translation initiation factor IF‑2
	?	NC_002947	5356257 =	67 (0.770)					intergenic (‑106/+11)	rbfA/infB	ribosome‑binding factor A/translation initiation factor IF‑2

CGACGGATCAGCTCGGCCAGCTCGCGCTGCATCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGAC  >  NC_002947/5356078‑5356375                                                                                                                                                      |                                                                                                                                                      ctgcgtcgcttcaaggacgatgcttccgaagtccgttcgggcatggagtgcggtattggcgtcaagagctacaacgacgtcaaggtcggcgacaagatcgaagtcttcgagaaagtccaggtggctcgtaccctttaagggcgagcgagc                                                                                                                                                       >  2:2277527‑M1/150‑150 (MQ=255) ctgcgtcgcttcaaggacgatgcttccgaagtccgttcgggcatggagtgcggtattggcgtcaagagctacaacgacgtcaaggtcggcgacaagatcgaagtcttcgagaaagtccaggtggctcgtaccctttaagggcgagcgagc                                                                                                                                                       >  2:410165‑M1/150‑150 (MQ=255)  gACGGATCAGCTCGGCCAGCTCGCGCTGCATCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCg                                                                                                                                                     >  1:1390874/1‑150 (MQ=255)     gtcgcttcaaggacgatgcttccgaagtccgttcgggcatggagtgcggtattggcgtcaagagctacaacgacgtcaaggtcggcgacaagatcgaagtcttcgagaaagtccaggtggctcgtaccctttaagggcgagcgagCCGCa                                                                                                                                                   <  1:478051‑M1/5‑1 (MQ=255)     ggATCAGCTCGGCCAGCTCGCGCTGCATCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCaa                                                                                                                                                  <  1:1370023/150‑1 (MQ=255)        tCAGCTCGGCCAGCTCGCGCTGCATCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAgcc                                                                                                                                               <  2:1479374/150‑1 (MQ=255)           gCTCGGCCAGCTCGCGCTGCATCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAgccgcc                                                                                                                                            >  2:1582060/1‑150 (MQ=255)                   aGCTCGCGCTGCATCTGATCGCCAATACGTTGGGTACGGCTATATACCTGGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCa                                                                                                                                    <  1:258354/150‑1 (MQ=255)                     cTCGCGCTGCATCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAgg                                                                                                                                  >  1:925549/1‑150 (MQ=255)                           cTGCATCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCGGCAGCGGGCGCTTg                                                                                                                            >  2:1323138/1‑150 (MQ=255)                            tGCATCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGc                                                                                                                           <  1:1852389/150‑1 (MQ=255)                                tccgttcgggcatggagtgcggtattggcgtcaagagctacaacgacgtcaaggtcggcgacaagatcgaagtcttcgagaaagtccaggtggctcgtaccctttaagggcgagcgagCCGCAAGCCGCCCTGTAGCAGGCGCTTGCGgc                                                                                                                        >  1:2347484‑M1/119‑150 (MQ=255)                                tCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGG‑AAACTCAATCGAGAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGgct                                                                                                                       <  2:683266/150‑1 (MQ=255)                                   gttcgggcatggagtgcggtattggcgtcaagagctacaacgacgtcaaggtcggcgacaagatcgaagtcttcgagaaagtccaggtggctcgtaccctttaagggcgagcgagCCGCaa                                                                                                                                                  >  2:2374827‑M1/116‑121 (MQ=255)                                   gttcgggcatggagtgcggtattggcgtcaagagctacaacgacgtcaaggtcggcgacaagatcgaagtcttcgagaaagtccaggtggctcgtaccctttaagggcgagcgagCCGCaa                                                                                                                                                  <  1:2374827‑M1/6‑1 (MQ=255)                                   gATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCAATCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGgctcgc                                                                                                                    <  1:1947236/150‑1 (MQ=255)                                       gCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCtcgctcgc                                                                                                                <  2:2007105/150‑1 (MQ=255)                                        ccAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGcc                                                                                                               >  2:1699654/1‑150 (MQ=255)                                        ccAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGcc                                                                                                               >  1:641019/1‑150 (MQ=255)                                         cAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGccc                                                                                                              >  2:13436/1‑150 (MQ=255)                                               gTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAg                                                                                                        >  2:487009/1‑150 (MQ=255)                                                ttGGGTACGGCTATATTCTTTGGACATTCTTGCTTCTTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAgg                                                                                                       <  2:20996/150‑1 (MQ=255)                                                   ggTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTa                                                                                                    <  2:689957/150‑1 (MQ=255)                                                    gTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAgcc                                                                                                                                               >  2:655904/1‑106 (MQ=255)                                                    gTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAgcc                                                                                                                                               <  1:655904/106‑1 (MQ=255)                                                       cGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACGTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAg                                                                                                <  1:1443691/150‑1 (MQ=255)                                                           tataTTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCAc                                                                                            <  1:1813472/150‑1 (MQ=255)                                                             tatTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCt                                                                                          <  1:1926926/150‑1 (MQ=255)                                                                 cTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGa                                                                                                 >  2:563569/1‑139 (MQ=255)                                                                 cTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGa                                                                                                 <  1:563569/139‑1 (MQ=255)                                                                  tttGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACt                                                                                     >  2:1972165/1‑150 (MQ=255)                                                                  tttGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACt                                                                                     >  2:1971288/1‑150 (MQ=255)                                                                  gagctacaacgacgtcaaggtcggcgacaagatcgaagtcttcgagaaagtccaggtggctcgtaccctttaagggcgagcgagCCGCAAGCCGCCCTGTAGCAGGCGCTTGCgg                                                                                                                         <  1:556209‑M1/31‑1 (MQ=255)                                                                  gagctacaacgacgtcaaggtcggcgacaagatcgaagtcttcgagaaagtccaggtggctcgtaccctttaagggcgagcgagCCGCAAGCCGCCCTGTAGCAGGCGCTTGCgg                                                                                                                         >  2:556209‑M1/85‑115 (MQ=255)                                                                     ggCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTTGACTTtc                                                                                  <  2:953923/150‑1 (MQ=255)                                                                       ccATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTtctc                                                                                <  2:1390874/150‑1 (MQ=255)                                                                          ttCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGaa                                                                             <  2:609698/150‑1 (MQ=255)                                                                                 tACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCg                                                                      <  1:1699654/150‑1 (MQ=255)                                                                                     tGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCt                                                                  >  2:179674/1‑150 (MQ=255)                                                                                      gTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCtt                                                                 >  2:1607802/1‑150 (MQ=255)                                                                                       tAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGgctcg                                                                                                                     >  1:1465294/1‑97 (MQ=255)                                                                                       tAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGgctcg                                                                                                                     <  2:1465294/97‑1 (MQ=255)                                                                                         aCTTAAAGCGGCAAACGG‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTc                                                              <  2:1578436/150‑1 (MQ=255)                                                                                                    cAAACGC‑CCGGACAGACGAATGCGTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGa                                                   >  2:1189272/1‑150 (MQ=255)                                                                                                     aaaCGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGAc                                                  <  1:487009/150‑1 (MQ=255)                                                                                                      aaCGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGAcg                                                 >  1:696429/1‑150 (MQ=255)                                                                                                       aCGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGAcgt                                                <  1:1323138/150‑1 (MQ=255)                                                                                                        cGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGAcgtc                                               <  2:641019/150‑1 (MQ=255)                                                                                                            ccGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGtt                                            >  1:214802/1‑150 (MQ=255)                                                                                                            ccGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGtt                                            <  2:925549/150‑1 (MQ=255)                                                                                                             cGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTg                                           <  2:1605779/150‑1 (MQ=255)                                                                                                              agaaagtccaggtggctcgtaccctttaagggcgagcgagCCGCAAGCCGCCCTGTAGCAGgcgc                                                                                                                               >  2:551270‑M1/41‑65 (MQ=255)                                                                                                              agaaagtccaggtggctcgtaccctttaagggcgagcgagCCGCAAGCCGCCCTGTAGCAGgcgc                                                                                                                               <  1:551270‑M1/25‑1 (MQ=255)                                                                                                                aCAGACGAATGCCTGACCGTGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGTAGATCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAg                                        <  1:1971288/150‑1 (MQ=255)                                                                                                                aCAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAg                                        <  1:1972165/150‑1 (MQ=255)                                                                                                                  aGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGa                                                                                                 <  2:435218/91‑1 (MQ=255)                                                                                                                  aGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGa                                                                                                 >  1:435218/1‑91 (MQ=255)                                                                                                                  aGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGct                                      >  1:358190/1‑150 (MQ=255)                                                                                                                  aGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGct                                      <  2:474718/150‑1 (MQ=255)                                                                                                                   gACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGctc                                     >  2:359830/1‑150 (MQ=255)                                                                                                                    aCGAATGCCTGACCGGGCGCTACCTGAAGTGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGctct                                    >  2:1055262/1‑150 (MQ=255)                                                                                                                    aCGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGctct                                    >  2:1542788/1‑150 (MQ=255)                                                                                                                          gCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGc                              <  1:1304155/150‑1 (MQ=255)                                                                                                                            cTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGAcgtc                                               >  2:186367/1‑131 (MQ=255)                                                                                                                            cTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGAcgtc                                               <  1:186367/131‑1 (MQ=255)                                                                                                                            cTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCa                            >  1:2398747/1‑150 (MQ=255)                                                                                                                              gACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGATCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAAt                          >  1:424560/1‑150 (MQ=255)                                                                                                                               aCCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATa                         <  2:1585136/150‑1 (MQ=255)                                                                                                                                  gggCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCg                      <  1:1582060/150‑1 (MQ=255)                                                                                                                                        tACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGa                                                                                       >  1:751205/1‑79 (MQ=255)                                                                                                                                        tACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGa                                                                                       <  2:751205/79‑1 (MQ=255)                                                                                                                                        tACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGGCGCCGAGCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTcc                >  2:864269/1‑150 (MQ=255)                                                                                                                                          ccTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCAt              >  1:60165/1‑150 (MQ=255)                                                                                                                                           cTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATg             <  1:359830/150‑1 (MQ=255)                                                                                                                                            tGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGc            >  1:1786920/1‑150 (MQ=255)                                                                                                                                                gagGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGtt                                            >  1:924399/1‑114 (MQ=255)                                                                                                                                                gagGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGtt                                            <  2:924399/114‑1 (MQ=255)                                                                                                                                                  ggTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAAc      <  1:176584/150‑1 (MQ=255)                                                                                                                                                   gTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACg     >  2:1067700/1‑150 (MQ=255)                                                                                                                                                   gTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACg     >  2:2404818/1‑150 (MQ=255)                                                                                                                                                   gTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACg     >  1:1717939/1‑150 (MQ=255)                                                                                                                                                      CCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGAc  <  1:1217503‑M1/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                      CGACGGATCAGCTCGGCCAGCTCGCGCTGCATCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGAC  >  NC_002947/5356078‑5356375

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.