New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5356226 =	66 (0.710)	5 (0.060)	5/234	NT	7.2%	intergenic (‑75/+42)	rbfA/infB	ribosome‑binding factor A/translation initiation factor IF‑2
	?	NC_002947	5356257 =	67 (0.770)					intergenic (‑106/+11)	rbfA/infB	ribosome‑binding factor A/translation initiation factor IF‑2

TCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATCGTCCTTGAAGCGACGCAG  >  NC_002947/5356109‑5356405                                                                                                                                                      |                                                                                                                                                     tccgttcgggcatggagtgcggtattggcgtcaagagctacaacgacgtcaaggtcggcgacaagatcgaagtcttcgagaaagtccaggtggctcgtaccctttaagggcgagcgagCCGCAAGCCGCCCTGTAGCAGGCGCTTGCGgc                                                                                                                                                      >  1:2347484‑M1/119‑150 (MQ=255) tCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGG‑AAACTCAATCGAGAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGgct                                                                                                                                                     <  2:683266/150‑1 (MQ=255)    gATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCAATCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGgctcgc                                                                                                                                                  <  1:1947236/150‑1 (MQ=255)        gCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCtcgctcgc                                                                                                                                              <  2:2007105/150‑1 (MQ=255)         ccAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGcc                                                                                                                                             >  2:1699654/1‑150 (MQ=255)         ccAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGcc                                                                                                                                             >  1:641019/1‑150 (MQ=255)          cAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGccc                                                                                                                                            >  2:13436/1‑150 (MQ=255)                gTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAg                                                                                                                                      >  2:487009/1‑150 (MQ=255)                 ttGGGTACGGCTATATTCTTTGGACATTCTTGCTTCTTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAgg                                                                                                                                     <  2:20996/150‑1 (MQ=255)                    ggTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTa                                                                                                                                  <  2:689957/150‑1 (MQ=255)                        cGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACGTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAg                                                                                                                              <  1:1443691/150‑1 (MQ=255)                            tataTTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCAc                                                                                                                          <  1:1813472/150‑1 (MQ=255)                              tatTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCt                                                                                                                        <  1:1926926/150‑1 (MQ=255)                                  cTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGa                                                                                                                               >  2:563569/1‑139 (MQ=255)                                  cTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGa                                                                                                                               <  1:563569/139‑1 (MQ=255)                                   tttGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACt                                                                                                                   >  2:1972165/1‑150 (MQ=255)                                   tttGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACt                                                                                                                   >  2:1971288/1‑150 (MQ=255)                                      ggCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTTGACTTtc                                                                                                                <  2:953923/150‑1 (MQ=255)                                        ccATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTtctc                                                                                                              <  2:1390874/150‑1 (MQ=255)                                           ttCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGaa                                                                                                           <  2:609698/150‑1 (MQ=255)                                                  tACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCg                                                                                                    <  1:1699654/150‑1 (MQ=255)                                                      tGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCt                                                                                                >  2:179674/1‑150 (MQ=255)                                                       gTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCtt                                                                                               >  2:1607802/1‑150 (MQ=255)                                                        tAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGgctcg                                                                                                                                                   <  2:1465294/97‑1 (MQ=255)                                                        tAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGgctcg                                                                                                                                                   >  1:1465294/1‑97 (MQ=255)                                                          aCTTAAAGCGGCAAACGG‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTc                                                                                            <  2:1578436/150‑1 (MQ=255)                                                                     cAAACGC‑CCGGACAGACGAATGCGTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGa                                                                                 >  2:1189272/1‑150 (MQ=255)                                                                      aaaCGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGAc                                                                                <  1:487009/150‑1 (MQ=255)                                                                       aaCGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGAcg                                                                               >  1:696429/1‑150 (MQ=255)                                                                        aCGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGAcgt                                                                              <  1:1323138/150‑1 (MQ=255)                                                                         cGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGAcgtc                                                                             <  2:641019/150‑1 (MQ=255)                                                                             ccGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGtt                                                                          >  1:214802/1‑150 (MQ=255)                                                                             ccGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGtt                                                                          <  2:925549/150‑1 (MQ=255)                                                                              cGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTg                                                                         <  2:1605779/150‑1 (MQ=255)                                                                                 aCAGACGAATGCCTGACCGTGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGTAGATCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAg                                                                      <  1:1971288/150‑1 (MQ=255)                                                                                 aCAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAg                                                                      <  1:1972165/150‑1 (MQ=255)                                                                                   aGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGa                                                                                                                               >  1:435218/1‑91 (MQ=255)                                                                                   aGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGa                                                                                                                               <  2:435218/91‑1 (MQ=255)                                                                                   aGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGct                                                                    >  1:358190/1‑150 (MQ=255)                                                                                   aGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGct                                                                    <  2:474718/150‑1 (MQ=255)                                                                                    gACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGctc                                                                   >  2:359830/1‑150 (MQ=255)                                                                                     aCGAATGCCTGACCGGGCGCTACCTGAAGTGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGctct                                                                  >  2:1055262/1‑150 (MQ=255)                                                                                     aCGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGctct                                                                  >  2:1542788/1‑150 (MQ=255)                                                                                           gCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGc                                                            <  1:1304155/150‑1 (MQ=255)                                                                                             cTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGAcgtc                                                                             <  1:186367/131‑1 (MQ=255)                                                                                             cTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGAcgtc                                                                             >  2:186367/1‑131 (MQ=255)                                                                                             cTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCa                                                          >  1:2398747/1‑150 (MQ=255)                                                                                               gACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGATCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAAt                                                        >  1:424560/1‑150 (MQ=255)                                                                                                aCCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATa                                                       <  2:1585136/150‑1 (MQ=255)                                                                                                   gggCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCg                                                    <  1:1582060/150‑1 (MQ=255)                                                                                                         tACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGa                                                                                                                     >  1:751205/1‑79 (MQ=255)                                                                                                         tACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGa                                                                                                                     <  2:751205/79‑1 (MQ=255)                                                                                                         tACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGGCGCCGAGCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTcc                                              >  2:864269/1‑150 (MQ=255)                                                                                                           ccTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCAt                                            >  1:60165/1‑150 (MQ=255)                                                                                                            cTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATg                                           <  1:359830/150‑1 (MQ=255)                                                                                                             tGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGc                                          >  1:1786920/1‑150 (MQ=255)                                                                                                                 gagGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGtt                                                                          <  2:924399/114‑1 (MQ=255)                                                                                                                 gagGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGtt                                                                          >  1:924399/1‑114 (MQ=255)                                                                                                                   ggTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAAc                                    <  1:176584/150‑1 (MQ=255)                                                                                                                    gTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACg                                   >  2:1067700/1‑150 (MQ=255)                                                                                                                    gTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACg                                   >  1:1717939/1‑150 (MQ=255)                                                                                                                    gTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACg                                   >  2:2404818/1‑150 (MQ=255)                                                                                                                      gccgcaagcgcctgctacagggcggcttgcggCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGa                                 >  1:2347484‑M2/33‑150 (MQ=255)                                                                                                                       ccgcaagcgcctgctacagggcggcttgcggCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGctc                                                                   <  1:556209‑M2/84‑1 (MQ=255)                                                                                                                       ccgcaagcgcctgctacagggcggcttgcggCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGctc                                                                   >  2:556209‑M2/32‑115 (MQ=255)                                                                                                                       CCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGAc                                <  1:1217503‑M1/150‑1 (MQ=255)                                                                                                                           AAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCg                            >  1:1189272‑M1/1‑150 (MQ=255)                                                                                                                             gcgcctgctacagggcggcttgcggCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTtct                                                                                                               >  2:551270‑M2/26‑65 (MQ=255)                                                                                                                             gcgcctgctacagggcggcttgcggCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTtct                                                                                                               <  1:551270‑M2/40‑1 (MQ=255)                                                                                                                             GCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGa                          <  1:2159742‑M1/150‑1 (MQ=255)                                                                                                                             GCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGa                          >  2:60165‑M1/1‑150 (MQ=255)                                                                                                                              CCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGaa                         >  1:1055262‑M1/1‑150 (MQ=255)                                                                                                                                 cccTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTATCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCGCTCCATGCCCGAACGGACTTCGGAAGCa                      >  1:155258/1‑150 (MQ=255)                                                                                                                                   cTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATc                    >  2:443058/1‑150 (MQ=255)                                                                                                                                   cTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATc                    >  2:2144608/1‑150 (MQ=255)                                                                                                                                    tGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCaa                                                         >  1:55251/1‑112 (MQ=255)                                                                                                                                    tGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCaa                                                         <  2:55251/112‑1 (MQ=255)                                                                                                                                       aGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATCGTcc                <  2:358190/150‑1 (MQ=255)                                                                                                                                        gCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGGGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATCGTCCt               <  1:13436/150‑1 (MQ=255)                                                                                                                                        gCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATCGTCCt               >  1:1814393/1‑150 (MQ=255)                                                                                                                                        gCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATCGTCCt               >  1:1814924/1‑150 (MQ=255)                                                                                                                                        gCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATCGTCCt               >  2:674046/1‑150 (MQ=255)                                                                                                                                         cAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATCGTCCtt              <  1:674046/150‑1 (MQ=255)                                                                                                                                            gcgcTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGa                                                                                 >  1:1477366/1‑80 (MQ=255)                                                                                                                                            gcgcTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGa                                                                                 <  2:1477366/80‑1 (MQ=255)                                                                                                                                                ttgcggCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAAc                                    <  1:2374827‑M2/115‑1 (MQ=255)                                                                                                                                                ttgcggCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAAc                                    >  2:2374827‑M2/7‑121 (MQ=255)                                                                                                                                                 tgcggCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATCGTCCTTGAAGCGAc      <  1:478051‑M2/145‑1 (MQ=255)                                                                                                                                                     gCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATCGTCCTTGAAGCGACGCAg  >  2:2277527‑M2/2‑150 (MQ=255)                                                                                                                                                     gCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATCGTCCTTGAAGCGACGCAg  >  2:410165‑M2/2‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                     TCTGATCGCCAATACGTTGGGTACGGCTATATTCTTTGGCCATTCTTGCTACCTGTAACTTAAAGCGGCAAACGC‑CCGGACAGACGAATGCCTGACCGGGCGCTACCTGAAGAGGTACCGCAAGCCGCCCTGTAGCAGGCGCTTGCGGCTCGCTCGCCCTTAAAGGGTACGAGCCACCTGGACTTTCTCGAAGACTTCGATCTTGTCGCCGACCTTGACGTCGTTGTAGCTCTTGACGCCAATACCGCACTCCATGCCCGAACGGACTTCGGAAGCATCGTCCTTGAAGCGACGCAG  >  NC_002947/5356109‑5356405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.