| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5980299 = | 112 (1.200) | 6 (0.070) | 5/246 | NT | 5.4% | coding (888/5049 nt) | PP_5242 | GAF domain‑containing sensor histidine kinase |
| ? | NC_002947 | 5980337 = | 100 (1.090) | coding (926/5049 nt) | PP_5242 | GAF domain‑containing sensor histidine kinase | |||||
Only 100 of 121 total aligned reads displayed.
CTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCAAGTCGAGCCTGGTCGAAGCCGC > NC_002947/5980150‑5980445 | cTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAgcg > 1:1385274/1‑150 (MQ=255) tCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCg > 2:2397251/1‑150 (MQ=255) ccTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCgg < 2:687384/150‑1 (MQ=255) ccTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCgg < 1:2055798/150‑1 (MQ=255) cTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGc > 1:1898248/1‑150 (MQ=255) tGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGcc > 1:1216871/1‑150 (MQ=255) ggCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCTGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCa < 2:1148017/150‑1 (MQ=255) aaaGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCAcgc < 1:270164/150‑1 (MQ=255) aaaGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCAcgc > 1:2418500/1‑150 (MQ=255) aaaGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCAAGCGTCAGTGGGCCGCCCACAAAACCATGGCACTCTGCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCAcgc > 1:532852/1‑150 (MQ=255) cTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCt > 2:268412/1‑150 (MQ=255) cTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCt > 1:1456165/1‑150 (MQ=255) cTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCt > 2:575811/1‑150 (MQ=255) cTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCGCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCt > 2:1884914/1‑150 (MQ=255) ttGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTg > 2:2272784/1‑150 (MQ=255) aaaGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGc < 1:2397251/150‑1 (MQ=255) gagCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCcgc < 2:2004093/150‑1 (MQ=255) ggACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGgcgc > 1:48713/1‑150 (MQ=255) gACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGcc > 2:1159774/1‑150 (MQ=255) gACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGcc < 2:418471/150‑1 (MQ=255) aCGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCg > 2:148026/1‑150 (MQ=255) cGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGa < 1:575811/150‑1 (MQ=255) ccGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCa > 1:869612/1‑150 (MQ=255) cTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCaaaa < 1:900079/150‑1 (MQ=255) tACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAg < 2:1741012/150‑1 (MQ=255) ggcttcgaccaggctcgacttgcccatgccagcagcgccgttgatgaccagggcttgtggtttgctatcgcgattcaaggccttgagcagcagggtgatagccttttGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAg > 1:1870134‑M1/108‑150 (MQ=255) gagCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGttt < 1:1831303/124‑1 (MQ=255) gagCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTAt > 1:2061469/1‑150 (MQ=255) agCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATc > 2:2251157/1‑150 (MQ=255) agCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATc > 2:1530851/1‑150 (MQ=255) gcgcCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCctgc > 1:1529519/1‑150 (MQ=255) gcCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCctgctg > 2:614072/1‑150 (MQ=255) cTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCtgctgcc > 2:2190119/1‑149 (MQ=255) ccatgccagcagcgccgttgatgaccagggcttgtggtttgctatcgcgattcaaggccttgagcagcagggtgatagccttttGCTCGGCGCCCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGa > 1:1407340‑M1/85‑127 (MQ=255) ccatgccagcagcgccgttgatgaccagggcttgtggtttgctatcgcgattcaaggccttgagcagcagggtgatagccttttGCTCGGCGCCCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGa < 2:1407340‑M1/43‑1 (MQ=255) aGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGccaaac > 1:2083915/1‑101 (MQ=255) aGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGccaaac < 2:2083915/105‑5 (MQ=255) gTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTg > 2:1389882/1‑106 (MQ=255) gTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGcc > 2:2322259/1‑150 (MQ=255) tGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCt < 1:268412/150‑1 (MQ=255) ttGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAAt > 1:2437617/1‑150 (MQ=255) gCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATcgc < 2:2303748/150‑1 (MQ=255) gCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATcgc > 1:120030/1‑150 (MQ=255) gCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATcgc < 1:2322259/150‑1 (MQ=255) gCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATcgc < 2:1169714/150‑1 (MQ=255) gCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGCCCAAGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATcgc > 1:753923/1‑150 (MQ=255) cTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATcgcg > 1:824454/1‑150 (MQ=255) tCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGa < 1:679140/150‑1 (MQ=255) tCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGa > 1:141602/1‑150 (MQ=255) tCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATAGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGa > 2:1025043/1‑150 (MQ=255) cACTGCCAGCGGCAGTGGGCCGCCCACAAACCCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGTGAt < 1:591027/150‑1 (MQ=255) aCTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATa > 2:880209/1‑150 (MQ=255) tGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGc > 1:2240375/1‑150 (MQ=255) cAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCaaa < 2:359393/150‑1 (MQ=255) cAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCaaa < 2:1898248/150‑1 (MQ=255) cAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCaaa < 2:824454/150‑1 (MQ=255) gTGGGCCGCCCACAAACCCCTGGCCCCCTCCGCCCCGGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGc < 2:1454891/150‑1 (MQ=255) ggCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCt < 2:83344/150‑1 (MQ=255) gccgccCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTg < 2:1529519/150‑1 (MQ=255) ccgccCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTgg < 2:1216871/150‑1 (MQ=255) cgccCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGt < 1:1884914/150‑1 (MQ=255) gtcccaaaaaCCATGGCACCCCTCCCCCCGGGCTGCGCCGGCCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGCGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGtc < 2:219505/144‑1 (MQ=255) gccCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGtc > 1:1201867/1‑150 (MQ=255) gccCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGtc > 1:19899/1‑150 (MQ=255) cccACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGtca < 2:781800/150‑1 (MQ=255) cccACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGtca > 2:359560/1‑150 (MQ=255) cccACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGtca > 1:571475/1‑150 (MQ=255) ccACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGtcat > 2:1315931/1‑150 (MQ=255) cacaAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGaa > 1:1102740/1‑119 (MQ=255) acaAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCtt < 2:675021/115‑1 (MQ=255) acaAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCtt > 1:675021/1‑115 (MQ=255) tatcgcgattcaaggccttgagcagcagggtgatagccttttGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCaaaa < 1:710944‑M1/42‑1 (MQ=255) tatcgcgattcaaggccttgagcagcagggtgatagccttttGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCaaaa > 2:710944‑M1/43‑84 (MQ=255) aTGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCt > 2:1163750/1‑56 (MQ=255) aTGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCt < 1:1163750/56‑1 (MQ=255) aTGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAgg > 2:1209232/1‑103 (MQ=255) aTGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAgg < 1:1209232/103‑1 (MQ=255) cACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGctgctg > 1:1212885/1‑150 (MQ=255) cTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCAt > 1:1623339/1‑150 (MQ=255) cTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCAt < 1:2272784/150‑1 (MQ=255) ttCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATg < 2:532852/150‑1 (MQ=255) ccccAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCa > 2:1119675/1‑150 (MQ=255) cccAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCaa < 2:1890745/87‑1 (MQ=255) cccAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGcc > 1:1472891/1‑118 (MQ=255) cccAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCaa > 2:713046/1‑150 (MQ=255) cccAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCaa > 1:850171/1‑150 (MQ=255) cAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCAAGt < 2:48713/150‑1 (MQ=255) gCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACTGCGCTGCTGGCATGGGCAAGTCGa < 2:869612/150‑1 (MQ=255) gCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCAAGTCGa < 2:141602/150‑1 (MQ=255) gCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCAAAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCa < 1:2017690/144‑1 (MQ=255) tGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCAAGTCGAGc < 2:1623339/150‑1 (MQ=255) ccGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCAAGTCGAGCCTgg > 2:2035690/1‑150 (MQ=255) cGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCAAGTCGAGCCTGGt < 1:1159774/150‑1 (MQ=255) cGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCAAGTCGAGCCTGGt > 2:2273442/1‑150 (MQ=255) cGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCAAGTCGAGCCTGGt < 1:1119675/150‑1 (MQ=255) aCCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCAAGTCGAGCCTGGTCg > 1:1469848/1‑150 (MQ=255) cGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCAAGTCGAGCCTGGTCGAAg < 2:1201867/150‑1 (MQ=255) cGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCAAGTCGAGCCTGGTCGAAg < 2:1201510/150‑1 (MQ=255) cGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCAAGTCGAGCCTGGTCGAAg < 2:19899/150‑1 (MQ=255) aGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCAAGTCGAGCCTGGTCGAAGCCGc > 2:2026168/1‑150 (MQ=255) | CTGGTCCTGGCAAAGGCCTTGGCCAAAGAGCCGGACGCCCGCTACCAGAGCGCGCGCGCCTTTGCAGTGGACTTGGCTCACTGCCAGCGGCAGTGGGCCGCCCACAAAACCATGGCACCCTTCACCCCAGGCTGCGCCGACCCGGTAGCGC‑‑‑‑‑‑‑CCGGCCACGCGCGCCTGTTTGGCCGCGGCGCCGAGCAAAAGGCTATCACCCTGCTGCTCAAGGCCTTGAATCGCGATAGCAAACCACAAGCCCTGGTCATCAACGGCGCTGCTGGCATGGGCAAGTCGAGCCTGGTCGAAGCCGC > NC_002947/5980150‑5980445 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |