| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1419553 = | 23 (0.250) | 11 (0.160) | 8/186 | NT | 46.7% | intergenic (‑36/+101) | PP_1242/PP_1244 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | 1419647 = | 8 (0.120) | intergenic (‑130/+7) | PP_1242/PP_1244 | hypothetical protein/hypothetical protein | |||||
GGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTT > NC_002947/1419564‑1419796 | GGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGc < 2:1555947‑M1/124‑1 (MQ=255)GGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGc > 1:1555947‑M1/1‑124 (MQ=255) ACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGAc < 2:2385038‑M1/150‑1 (MQ=255) cccgctcccacagggtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgcgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGCAAATGCGCCCGCATCTGCAACTGCATCAACGCCGACTCg > 2:1157814‑M2/77‑150 (MQ=255) ccgctcccacagggtcaccacagccgtcacgcactgcccagtacctgtgggagcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGAcc < 2:1307002‑M2/45‑1 (MQ=255) ccgctcccacagggtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGAcc > 1:1307002‑M2/76‑120 (MQ=255) ccgctcccacagggtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGa > 1:2251137‑M2/76‑150 (MQ=255) ccgctcccacagggtcaccacagccgtcacgcactgcacagtacctgggggagcgggcgtgcccgcgaataggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGa > 2:1229933‑M2/76‑150 (MQ=255) CCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCTACTCGa > 1:588582‑M1/1‑150 (MQ=255) CCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCTACTCGa < 2:588582‑M1/150‑1 (MQ=255) gctcccacagggtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGAcc > 1:78369‑M2/74‑150 (MQ=255) gctcccacagggtcaccacagccgtcacgcactgcacagtacctgtgccagcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGGAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGAcc > 1:1240527‑M2/74‑150 (MQ=255) tcccacagggtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAg > 2:1576778‑M2/72‑150 (MQ=255) ccacagggtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTaa < 2:1847739‑M2/37‑1 (MQ=255) ccacagggtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTaa > 1:1847739‑M2/70‑106 (MQ=255) CAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCt < 2:2155563‑M1/150‑1 (MQ=255) tgtgCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGc > 1:1112524/1‑150 (MQ=255) tgtgCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGc > 1:639171/1‑150 (MQ=255) gCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGa < 1:2151840/79‑1 (MQ=255) gCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGa > 2:2151840/1‑79 (MQ=255) cAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTcc > 2:829548/1‑150 (MQ=255) tcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCa < 1:1576778‑M2/101‑1 (MQ=255) tGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCAt > 2:276922/1‑150 (MQ=255) tGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCAt < 1:2155563/150‑1 (MQ=255) tGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCAt > 1:276164/1‑150 (MQ=255) gtgACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGc‑c > 2:2268226/1‑150 (MQ=255) aCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGa > 2:2261034/1‑109 (MQ=255) aCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGa < 1:2261034/109‑1 (MQ=255) cctgtgggagcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGCAt > 1:2012830‑M2/33‑150 (MQ=255) tgggagcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGCATCACg > 2:93533‑M2/29‑150 (MQ=255) gggagcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGCATCACGa < 2:1112524‑M2/123‑1 (MQ=255) ggcgagggcgtgctgacgaggatgccTGACCTGCGAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGCATCACGAt < 2:1240527‑M2/124‑1 (MQ=255) gagcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGCATCACGATc < 1:2385038‑M2/125‑1 (MQ=255) gcgggcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGCATCACGATCGa < 2:78369‑M2/127‑1 (MQ=255) gcgtgcccgcgaagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGCATCACGATCGAGCtg > 2:1559464‑M2/20‑150 (MQ=255) ccgcgaagaggccTGACCCGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGCATCACGATCGAGCTGTGGGCg > 2:2318353‑M2/14‑150 (MQ=255) aagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGTTAAATTGGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGCATCACGATCGAGCTGTGGGCGGTggg > 1:554579‑M2/9‑150 (MQ=255) aagaggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGCATCACGATCGAGCTGTGGGCGGTggg > 1:487926‑M2/9‑150 (MQ=255) caggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGCATCACGATCGAGCTGTGGGCGGTGGGt > 1:555068‑M2/7‑149 (MQ=255) caggccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGCATCACGATCGAGCTGTGGGCGGTGGGt < 2:555068‑M2/143‑1 (MQ=255) gccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGc < 2:2340342‑M2/116‑1 (MQ=255) gccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGc > 1:2340342‑M2/4‑119 (MQ=255) gccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGa > 2:494518‑M2/4‑150 (MQ=255) gccTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATC‑CGACTCTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGa > 1:1947025‑M2/4‑150 (MQ=255) gccTGACCTGCTAATGCAAGGTGTGAGACTTTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCACTTCATGGATCACGGC‑CTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGa > 1:437495‑M2/4‑150 (MQ=255) tGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCACCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGCATCACGATCGAGCGATGGGCGGTGGGTTTGAGtt > 2:917086/1‑150 (MQ=255) tGACCTGCTAATGCAAGGCGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGtt > 1:1376310/1‑150 (MQ=255) | GGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGC‑CTGCATCACGATCGAGCTGTGGGCGGTGGGTTTGAGTT > NC_002947/1419564‑1419796 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |