New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 4573275102 (1.090)5 (0.070) 5/200 NT 5.2% intergenic (+39/‑98) PP_4054/glgX hypothetical protein/glycogen debranching enzyme
?NC_002947 = 4573292 101 (1.350)intergenic (+56/‑81) PP_4054/glgX hypothetical protein/glycogen debranching enzyme

Only 100 of 142 total aligned reads displayed.

GGCGCCTGCCGAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCATGCCCT  >  NC_002947/4573143‑4573439
                                                                                                                                                      |                                                                                                                                                   
   gcCTGCCGAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgt                                                                                                                                                  <  2:2305721‑M2/150‑4 (MQ=255)
     cTGCCGAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtag                                                                                                                                                <  1:2237816‑M2/150‑6 (MQ=255)
       gCCGAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCAGTGCAG‑CGTCACCGGCTGGGAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtagga                                                                                                                                              <  2:1242633‑M2/150‑8 (MQ=255)
         cGAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCAGGCGGTGAAAAAGCCTACTGCAGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagc                                                                                                                                            <  1:396556‑M2/150‑10 (MQ=255)
          gAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcg                                                                                                                                           >  2:926193‑M2/1‑140 (MQ=255)
           aaCCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgg                                                                                                                                          >  1:1297698‑M2/1‑139 (MQ=255)
           aaCCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgg                                                                                                                                          >  2:737134‑M2/1‑139 (MQ=255)
            aCCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGTCAAGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcggg                                                                                                                                         >  1:1841040‑M2/1‑138 (MQ=255)
            aCCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCAGGCGGTGAAAAAGCCTACTGCAGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcggg                                                                                                                                         >  2:396556‑M2/1‑138 (MQ=255)
               cAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgggttt                                                                                                                                      <  1:756687‑M2/150‑16 (MQ=255)
               cAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgggttt                                                                                                                                      >  1:236366‑M2/1‑135 (MQ=255)
                  ggcggcTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgggtaaacc                                                                                                                                   >  1:881041‑M2/1‑132 (MQ=255)
                           cctgccGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTg                                                                                                                          >  1:1602038/1‑150 (MQ=255)
                           cctgccGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTg                                                                                                                          >  2:1474216/1‑150 (MQ=255)
                            ctgccGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTgg                                                                                                                         <  1:575013/150‑1 (MQ=255)
                             tgccGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGc                                                                                                                        <  2:1602038/150‑1 (MQ=255)
                                cGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGACACTGTGTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCaa                                                                                                                     <  1:1453092/150‑1 (MQ=39)
                                cGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCaa                                                                                                                     >  2:627436/1‑150 (MQ=255)
                                   gggTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGc                                                                                                                  <  2:126540/150‑1 (MQ=255)
                                   gggTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGc                                                                                                                  <  2:2237816/150‑1 (MQ=255)
                                    ggTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAATCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCa                                                                                                                 <  1:1236600/150‑1 (MQ=255)
                                    ggTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCa                                                                                                                 <  2:1759787/150‑1 (MQ=255)
                                     gTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAg                                                                                                                <  1:627436/150‑1 (MQ=255)
                                     gTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTCTACCCGCGAAGTGGCCAATGCAg                                                                                                                <  2:1183080/150‑1 (MQ=255)
                                     gTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGCATCTCCTGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACTCGCGAAGTGGCCAATGCAg                                                                                                                >  1:1333318/1‑150 (MQ=255)
                                      ttAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAgg                                                                                                               >  2:1037727/1‑150 (MQ=255)
                                         aaCCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACa                                                                                                            <  2:655555/150‑1 (MQ=255)
                                          aCCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGAGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAg                                                                                                           <  1:1716384/150‑1 (MQ=255)
                                           cccACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGc                                                                                                          >  1:481285/1‑150 (MQ=255)
                                            ccACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGca                                                                                                         <  2:1457617/150‑1 (MQ=255)
                                                  cGGTGAAACAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCATACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTc                                                                                                   <  1:1578440/150‑1 (MQ=255)
                                                   ggTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTcc                                                                                                  >  2:2006332/1‑150 (MQ=255)
                                                    gTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTccc                                                                                                 <  2:481285/150‑1 (MQ=255)
                                                     taaaaaaGCCCCGGCCGGTCAAAACGCCTCCTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTCAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTcccc                                                                                                <  1:1502511/148‑1 (MQ=39)
                                                      gAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCCAAATACCCCt                                                                                               <  2:1274131/150‑1 (MQ=255)
                                                      gAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCt                                                                                               <  1:1037727/150‑1 (MQ=255)
                                                         aaaGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGc                                                                                                                        >  1:572707/1‑122 (MQ=255)
                                                         aaaGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGc                                                                                                                        <  2:572707/122‑1 (MQ=255)
                                                                     ggTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgggtttacccgcgaa                                                                                                                             >  1:1887922‑M2/1‑81 (MQ=255)
                                                                     ggTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgggtttacccgcgaa                                                                                                                             <  2:1887922‑M2/105‑25 (MQ=255)
                                                                       tGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCg                                                                              <  2:2395757/150‑1 (MQ=255)
                                                                        gAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGa                                                                             <  2:516098/150‑1 (MQ=255)
                                                                        gAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGATAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGa                                                                             <  1:355603/150‑1 (MQ=255)
                                                                        gAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGATAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGa                                                                             >  2:355603/1‑150 (MQ=255)
                                                                           aaaGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGa                                                                          >  1:30027/1‑150 (MQ=255)
                                                                             aGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATc                                                                        <  1:1347441/150‑1 (MQ=255)
                                                                             aGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATc                                                                        <  2:756687/150‑1 (MQ=255)
                                                                                cTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTc                                                                     >  1:2423484/1‑150 (MQ=255)
                                                                                 tACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCa                                                                    >  1:263489/1‑150 (MQ=255)
                                                                                    tGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgg                                                                                                                                          <  2:1852817‑M2/77‑12 (MQ=255)
                                                                                    tGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGa                                                                 <  2:1639993/150‑1 (MQ=255)
                                                                                    tGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGa                                                                 <  1:1734822/150‑1 (MQ=255)
                                                                                      ccGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGc                                                               >  1:2075721/1‑150 (MQ=255)
                                                                                        ggTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTACTCTTCCGTCACGGGCACTCGAGGATCGTCATGAGccc                                                             >  2:2229507/1‑150 (MQ=255)
                                                                                         gTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAg                                                                                                                >  2:1873501/1‑98 (MQ=255)
                                                                                         gTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAg                                                                                                                <  1:1873501/98‑1 (MQ=255)
                                                                                         gTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCt                                                                                               >  2:559075/1‑115 (MQ=255)
                                                                                         gTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCt                                                                                               <  1:559075/115‑1 (MQ=255)
                                                                                              gCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCAc                                                       >  1:293745/1‑150 (MQ=255)
                                                                                               ccTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCAc                                                       <  1:660870/149‑1 (MQ=255)
                                                                                                cTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAg                                                                                                                <  2:345261/91‑1 (MQ=255)
                                                                                                cTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAg                                                                                                                >  1:345261/1‑91 (MQ=255)
                                                                                                    ccGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCaaa                                                 <  2:1333318/150‑1 (MQ=255)
                                                                                                      gggCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGa                                               >  1:1420314/1‑150 (MQ=255)
                                                                                                        gCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAg                                                                                                                >  1:1017542/1‑83 (MQ=255)
                                                                                                        gCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAg                                                                                                                <  2:1017542/83‑1 (MQ=255)
                                                                                                        gCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGaaa                                             <  1:1474216/150‑1 (MQ=255)
                                                                                                         ccTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAg                                                                                                                <  2:1944027/82‑1 (MQ=255)
                                                                                                         ccTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAg                                                                                                                >  1:1944027/1‑82 (MQ=255)
                                                                                                         ccTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGaaaa                                            >  1:727004/1‑150 (MQ=255)
                                                                                                          ctctTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgggtttacccgcgaagaggcccggacaggcttaaccggcagtaggctttttcaccgcccggggctttttcaccgcagtgg                                                            <  2:1631971‑M2/133‑90 (MQ=255)
                                                                                                          ctctTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcgggtttacccgcgaagaggcccggacaggcttaaccggcagtaggctttttcaccgcccggggctttttcaccgcagtgg                                                            >  1:1631971‑M2/1‑44 (MQ=255)
                                                                                                           tctTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAAcc                                          >  1:621034/1‑150 (MQ=255)
                                                                                                           tctTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAAcc                                          >  2:2278172/1‑150 (MQ=255)
                                                                                                             ttCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGa                                                                             <  2:1872520/113‑1 (MQ=255)
                                                                                                             ttCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGa                                                                             >  1:1872520/1‑113 (MQ=255)
                                                                                                             ttCG‑CGGGTAAACCCGCTCCTACAGGCTCATCAAGAACGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACATCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGagatcgga                                        >  1:565064/1‑143 (MQ=38)
                                                                                                                g‑cgGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATc                                                                        <  1:1619427/115‑1 (MQ=255)
                                                                                                                g‑cgGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATc                                                                        >  2:1619427/1‑115 (MQ=255)
                                                                                                                     gTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCa                                                                                                                 >  2:2162138/1‑70 (MQ=255)
                                                                                                                     gTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCa                                                                                                                 <  1:2162138/70‑1 (MQ=255)
                                                                                                                        aaCCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCa                              <  1:896861/150‑1 (MQ=255)
                                                                                                                          cccGCTCCTACAGGTTCATCACAGGCGCAtgtaggagcggg                                                                                                                                         >  2:1612565‑M2/1‑29 (MQ=255)
                                                                                                                          cccGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTc                                                                               <  2:955938/99‑1 (MQ=255)
                                                                                                                          cccGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTc                                                                               >  1:955938/1‑99 (MQ=255)
                                                                                                                           ccGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGGAGTGGCCAATGCAGGACAGCGCAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGGTCGTTCGCAccc                           >  2:1330488/1‑149 (MQ=255)
                                                                                                                           ccGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCt                                      <  2:486137/139‑1 (MQ=255)
                                                                                                                           ccGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCt                                      >  1:486137/1‑139 (MQ=255)
                                                                                                                           ccGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAACAAAACCCGCTCGGTCGCACCa                           >  2:1099163/1‑150 (MQ=255)
                                                                                                                             gCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAg                                                                                                                <  1:105323/63‑1 (MQ=255)
                                                                                                                               tCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCaaa                                                 >  2:2098826/1‑124 (MQ=255)
                                                                                                                               tCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCaaa                                                 <  1:2098826/124‑1 (MQ=255)
                                                                                                                                      ggTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAACGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTcg                <  1:2305721/150‑1 (MQ=255)
                                                                                                                                       gTTCATCACAGGCGCAtgtaggagcgggtttacccgcgaagaggcccggacaggcttaaccggca                                                                                                    <  2:2431779‑M2/65‑50 (MQ=255)
                                                                                                                                          catcaCAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACCATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGaa            >  1:1268423/1‑150 (MQ=255)
                                                                                                                                               caGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCAt       <  2:293745/150‑1 (MQ=255)
                                                                                                                                               caGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCAt       <  2:2423484/150‑1 (MQ=255)
                                                                                                                                                 ggCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACACCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCATGc     <  2:30027/150‑1 (MQ=255)
                                                                                                                                                    gcATGGAGTAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCATGCCCt  >  2:1807209/1‑150 (MQ=255)
                                                                                                                                                      aTGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTc                 <  1:1604884/133‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                   
GGCGCCTGCCGAACCCAAGGCGGCTGCCCTGCCGGGGGTTAAACCCACTGCGGTGAAAAAGCCCCGGGCGGTGAAAAAGCCTACTGCCGGTTAAGCCTGTCCGGGCCTCTTCG‑CGGGTAAACCCGCTCCTACAGGTTCATCACAGGCGCATGTAGGAGCGGGTTTACCCGCGAAGTGGCCAATGCAGGACAGCACAATTCCCCTTCCATCACGGCCACTCGAGGATCGTCATGAGCCCCCGCACCCCAAAGAAAACCCGCTCGGTCGCACCATCGCGCATTCGCGAAGGCATGCCCT  >  NC_002947/4573143‑4573439

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.