| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5787692 | 52 (1.470) | 8 (0.230) | 8/264 | 2.8 | 13.2% | coding (157/774 nt) | PP_5070 | ParA family protein |
| ? | NC_002947 | = 5787707 | 55 (1.610) | coding (142/774 nt) | PP_5070 | ParA family protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCGGCCAGCTCGGCAGTGGCGGTGACCACATGCAGGTTGTCGAACGGGGTTTCGTAGATATCGACCTTGTTCTTCTTGCTGAACGGCCCGCTGGAAAGGCTTTGCTTGAAGAAATCGGCGATGCCCATGGGGATGTCCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5787553‑5787692‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcACCGGCCTGACCGGCGAGGACATCCCCATGGGCATCGCCGATTTCTTCAAGCAAAGCCTTTCCAGCGGGCCGTTCAGCAAGAAGAACAAGGTCGATATCTAC < NC_002947/5787707‑5787606 TCGGCCAGCTCGGCAGTGGCGGTGACCACATGCAGGTTGTCGAACGGGGTTTCGTAGATATCGACCTTGTTCTTCTTGCTGAACGGCCCGCTGGAAAGGCTTTGCTTGAAGAAATCGGCGATGCCCATGGGGATGTCCTCACCGGC > 1:377066/1‑146TCGGCCAGCTCGGCAGTGGCGGTGACCACATGCAGGTTGTCGAACGGGGTTTCGTAGATATCGACCTTGTTCTTCTTGCTGAACGGCCCGCTGGAAAGGCTTTGCTTGAAGAAATCGGCGATGCCCATGGGGATGTCCTCACCGGC < 2:377066/146‑1 CGCTGGAAAGGCTTTGCTTGAAGAAATCGGCGATGCCCATGGGGATGTCCTCACCGGCCTGACCGGCGA < 1:221907/69‑1 CGCTGGAAAGGCTTTGCTTGAAGAAATCGGCGATGCCCATGGGGATGTCCTCACCGGCCTGACCGGCGA > 2:221907/1‑69 CGATGCCCATGGGGATGTCCTCGCCGGTCAGGCCGGTGAGGACATCCCCATGGGCATCGCCGATTTCTTCAAGCAAAGCCTTTCCAGCGGGCCGTTCAGCAAGAAGAAC > 1:662422/1‑109 CGATGCCCATGGGGATGTCCTCGCCGGTCAGGCCGGTGAGGACATCCCCATGGGCATCGCCGATTTCTTCAAGCAAAGCCTTTCCAGCGGGCCGTTCAGCAAGAAGAAC < 2:662422/109‑1 ATGCCCATGGGGATGTCCTCGCCGGTCAGGCCGGTGAGGACATCCCCATGGGCATCGCCGATTTCTTCAAGCAAAGCCTTTCCAGCGGGCCGTTCAGCAAGAAGAACAAGGTCGATATCTAC < 1:330460/122‑1 ATGCCCATGGGGATGTCCTCGCCGGTCAGGCCGGTGAGGACATCCCCATGGGCATCGCCGATTTCTTCAAGCAAAGCCTTTCCAGCGGGCCGTTCAGCAAGAAGAACAAGGTCGATATCTAC > 2:330460/1‑122 TCGGCCAGCTCGGCAGTGGCGGTGACCACATGCAGGTTGTCGAACGGGGTTTCGTAGATATCGACCTTGTTCTTCTTGCTGAACGGCCCGCTGGAAAGGCTTTGCTTGAAGAAATCGGCGATGCCCATGGGGATGTCCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5787553‑5787692‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctcACCGGCCTGACCGGCGAGGACATCCCCATGGGCATCGCCGATTTCTTCAAGCAAAGCCTTTCCAGCGGGCCGTTCAGCAAGAAGAACAAGGTCGATATCTAC < NC_002947/5787707‑5787606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |