New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 626190	38 (1.080)	7 (0.210)	7/260	3.1	15.5%	coding (338/816 nt)	mtfA	glucose‑regulated peptidase
	?	NC_002947	= 626200	40 (1.190)					coding (328/816 nt)	mtfA	glucose‑regulated peptidase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCATGTCGAGCTTGTGCGCCAGCTCATGGATGACCAGGTTGTAAGCCTCCCAGCCACCACTGGCCTGCACGCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCAGCTCACCCAGGTGAAGCAGCGGTAACTGTGCCTGGGCGGCCAGCATTAGGCGCTGCTCGTCGTCCAGCTC  >  NC_002947/626041‑626338                                                                                                                                                      |                                                                                                                                                     gCATGTCGAGCTTGTGCGCCAGCTCATGGATGACCAGGTTGTAAGCCTCCCAGCCACCACTGGCCTGCACGCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCAc                                                                                                                                                      >  1:394535/1‑150 (MQ=255) gCATGTCGAGCTTGTGCGCCAGCTCATGGATGACCAGGTTGTAAGCCTCCCAGCCACCACTGGCCTGCACGCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCAc                                                                                                                                                      >  1:312454/1‑150 (MQ=255)   aTGTCGAGCTTGTGCGCCAGCTCATGGATGACCAGGTTGTAAGCCTCCCAGCCACCACTGGCCTGCACGCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTg                                                                                                                                                    >  2:739545/1‑150 (MQ=255)      tCGAGCTTGTGCGCCAGCTCATGGATGACCAGGTTGTAAGCCTCCCAGCCACCACTGGCCTGCACGCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCa                                                                                                                                                 >  1:202946/1‑150 (MQ=255)      tCGAGCTTGTGCGCCAGCTCATGGATGACCAGGTTGTAAGCCTCCCAGCCACCACTGGCCTGCACGCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCa                                                                                                                                                 >  1:250313/1‑150 (MQ=255)                     aGCTCATGGATGACCAGGTTGTAAGCCTCCCAGCCACCACTGGCCTGCACGCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTgg                                                                                                                                  <  2:312454/150‑1 (MQ=255)                             gATGACCAGGTTGTAAGCCTCCCAGCCACCACTGGCCTGCACGCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCtt                                                                                                                          >  1:259434/1‑150 (MQ=255)                                gACCAGGTTGTAAGCCTCCCAGCCACCACTGGCCTGCACGCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGaa                                                                                                                       <  2:118611/150‑1 (MQ=255)                                  ccAGGTTGTAAGCCTCCCAGCCACCACTGGCCTGCACGCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAgt                                                                                                                     >  1:343381/1‑150 (MQ=255)                                  ccAGGTTGTAAGCCTCCCAGCCACCACTGGCCTGCACGCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAgt                                                                                                                     >  1:92254/1‑150 (MQ=255)                                     ggTTGTAAGCCTCCCAGCCACCACTGGCCTGCACGCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTCCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAgtcgt                                                                                                                  >  2:369919/1‑150 (MQ=255)                                           aaGCCTCCCAGCCACCACTGGCCTGCACGCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGt                                                                                                            >  2:589189/1‑150 (MQ=255)                                                tCCCAGCCACCACTGGCCCGCACGCCGTTCCAGGCCAGGATGATCGACCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAgg                                                                                                       >  2:144233/1‑150 (MQ=255)                                                                    cACGCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTg                                                                                   <  2:742012/150‑1 (MQ=255)                                                                    cACGCCGTCCCCGCCCAGGATGATCGGCCCCTGTTGTCAGTCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCCTAAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTg                                                                                   <  1:215642/150‑1 (MQ=255)                                                                     aCGCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTgg                                                                                  <  2:701470/150‑1 (MQ=255)                                                                       gCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTa                                                                                >  2:683272/1‑150 (MQ=255)                                                                       gCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTa                                                                                >  1:663110/1‑150 (MQ=255)                                                                        ccGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTAc                                                                               >  1:618977/1‑150 (MQ=255)                                                                           ttCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAg                                                                            <  2:394535/150‑1 (MQ=255)                                                                                  ccaggATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCAGCt                                                                     <  1:137558/150‑1 (MQ=255)                                                                                              gCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCAGCTCACCCAggccct                                                         <  1:815515/150‑5 (MQ=255)                                                                                               ccccTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCAGCTCACCCAGGTGAag                                                        <  2:284284/150‑1 (MQ=255)                                                                                                     ttGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTAATACCCTTGGTACCAGTTCAGCTCACCCAGGTGAAGCAGCgg                                                  >  1:229666/1‑150 (MQ=255)                                                                                                        ccAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCAGCTCACCCAGGTGAAGCAGCGGTaa                                               <  1:182203/150‑1 (MQ=255)                                                                                                        ccAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCAGCTCACCCAGGTGAAGCAGCGGTaa                                               <  1:739545/150‑1 (MQ=255)                                                                                                          aGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCAGCTCACCCAGGTGAAGCAGCGGTAACt                                             >  2:714934/1‑150 (MQ=255)                                                                                                            gCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCAGCTCACCCAGGTGAAGCAGCGGTAACtgt                                           >  1:248347/1‑150 (MQ=255)                                                                                                              ttCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCAGCTCACCCAGGTGAAGCAGCGGTAACTGTGc                                         <  2:250313/150‑1 (MQ=255)                                                                                                                cgccgcTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCAGCTCACCCAGGTGAAGCAGCGGTAACTGTGCCt                                       <  2:248347/150‑1 (MQ=255)                                                                                                                   cgcTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCAGCTCACCCAGGTGAAGCAGCGGTAACTGTGCCTggg                                    >  2:669857/1‑150 (MQ=255)                                                                                                                    gcTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCACTTCAGCTCACCCAGGTGAAGCAGCGGTAACTGTGCCTGggc                                   >  1:284509/1‑150 (MQ=255)                                                                                                                       gtgtTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCGGCTCACCCAGGTGAAGCAGCGGTAACTGTGCCTGggcggc                                <  2:749111/150‑1 (MQ=255)                                                                                                                               cGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCAGCTCACCCAGGTGAAGCAGCGGTAACTGTGCCTGGGCGGCCAGCATTa                        <  1:683272/150‑1 (MQ=255)                                                                                                                                   ccACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCAGCTCACCCAGGTGAAGCAGCGGGAACTTTGCCTGTGCGGCCAGCATTAGgcg                    >  2:444385/1‑150 (MQ=255)                                                                                                                                             tCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGGACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCAGCTCACCCAGGTGAAGCAGCGGTAACTGTGCCTGGGCGGCCAGCATTAGGCGCTGCtcgtcg          >  2:468442/1‑150 (MQ=255)                                                                                                                                              ccACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCAGCTCACCCAGGTGAAGCAGCGGTAACTGTGCCTGGGCGGCCAGCATTAGGCGCTGCTcgtcgt         >  2:305629/1‑150 (MQ=255)                                                                                                                                                aggCCACTGGCAGCGCGGTGGCGCTGGGGGGTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCAGCTCACCCAGGTGAAGCAGCGGTAACTGTGCCTGGGCGGCCAGCATTAGGCGCTGCTCGTCGTcc       <  2:284509/148‑1 (MQ=255)                                                                                                                                                    cACTGGCATCGCGGTGGCGCTGCACGCCTTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCCATCAAGCTCACCCAGGTGAAAGTAAAAAAACTGGCGGTCAGCTTCCAGCATTAGGCGCTGCTCGTCGTCCAGCt   <  1:369919/150‑1 (MQ=255)                                                                                                                                                     aCTGGCATCGCGGTGGTGCTGGGGGCGCTTGAAATAGACAGGGTACAGGTGGATATCATGGAAGCCTAGGTACCACTTCAGCTCACCCAGGTGAAGCAGCGGTACCTGTGCCAGGGCGACCAGCATTAGGCGCTGCTCGTGGTCCAGCTc  >  2:57447/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                     GCATGTCGAGCTTGTGCGCCAGCTCATGGATGACCAGGTTGTAAGCCTCCCAGCCACCACTGGCCTGCACGCCGTTCCAGGCCAGGATGATCGGCCCCTGTTGCCAGGCTTCGCCGCTGTGTTCGCCGTCCCACACATGCTCCACGCCACTGGCATCGCGGTGGCGCTGGGGGCTCTTGAAGTCGTCGGGGTACAGGATGATTTCGTGGAAGCCTTGGTACCAGTTCAGCTCACCCAGGTGAAGCAGCGGTAACTGTGCCTGGGCGGCCAGCATTAGGCGCTGCTCGTCGTCCAGCTC  >  NC_002947/626041‑626338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.