| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4340085 = | 13 (0.370) | 10 (0.380) | 8/204 | 2.1 | 65.0% | intergenic (+26/‑305) | ribAB‑II/PP_3814 | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein |
| ? | NC_002947 | 4340169 = | 1 (0.040) | intergenic (+110/‑221) | ribAB‑II/PP_3814 | 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase/polyamine ABC transportersubstrate‑binding protein | |||||
CAGGACCTTGGCGTGGGCAAGCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGG > NC_002947/4339940‑4340145 | cAGGACCTTGGCGTGGGCAAGCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGcc > 2:372660/1‑150 (MQ=255) gCGTGGGCAAGCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGAATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGc < 2:805334/150‑1 (MQ=255) ctggtggccgtttttaattgtaggtgccggcctgcagactcaaggtctacgggatatcatattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCgg > 2:273195‑M1/134‑150 (MQ=255) gggCAAGCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGt < 1:26779/150‑1 (MQ=255) aGCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTAcc < 2:50572/150‑1 (MQ=255) gCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGt > 2:811786/1‑144 (MQ=255) gCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGt < 1:811786/144‑1 (MQ=255) tGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCcgc < 1:372660/150‑1 (MQ=255) cTGGGGCCGCCTCTGAAATACGTGGGGCTGGCGGGCAACTGTCTGGAGGTTGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGa < 1:8273/150‑1 (MQ=255) tGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCACGTTCTACCCGGGGCTGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGCTTACCCGCGAATGCGAg < 1:415246/150‑1 (MQ=255) gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg < 2:219157/150‑1 (MQ=255) gCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg < 2:540869/150‑1 (MQ=255) tattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAg > 2:358911‑M1/75‑85 (MQ=255) tattatggtattccaagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAg < 1:358911‑M1/11‑1 (MQ=255) gCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg < 2:394224/123‑1 (MQ=255) gCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg > 1:394224/1‑123 (MQ=255) caagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGAc > 1:712650‑M1/62‑112 (MQ=255) caagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGAc < 2:712650‑M1/51‑1 (MQ=255) aagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAAt > 1:600540‑M1/61‑91 (MQ=255) aagattttggcaagaggtatggggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAAt < 2:600540‑M1/31‑1 (MQ=255) gggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg < 1:96103‑M1/61‑1 (MQ=255) gggcgaccggccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg > 2:96103‑M1/40‑100 (MQ=255) gccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg < 2:519040‑M1/61‑1 (MQ=255) gccatcactccgccctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg > 1:519040‑M1/31‑91 (MQ=255) cctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg > 2:19886‑M1/18‑78 (MQ=255) cctgtcaaaagcaccaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCgg < 1:19886‑M1/61‑1 (MQ=255) accaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgcg < 1:589877‑M1/60‑1 (MQ=255) accaaGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTcgcg > 2:589877‑M1/6‑65 (MQ=255) | CAGGACCTTGGCGTGGGCAAGCTGCGTCACCTGGGGCCGCCGCTGAAATACGCGGGGCTGGCGGGCTATGAGCTGGAGGTGGTGCAGAGCATCCCGTTCGACCCGGGGATGGATGGCTGAGAACACACAAGCAATTGATTTAGCGGGGCCCTGTAGGAGCGGGTTTACCCGCGAATGCGAGGGTGACACCACCGACGCATTCGCGG > NC_002947/4339940‑4340145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |