| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 200753 = | 32 (0.740) | 6 (0.150) | 4/242 | NT | 13.3% | coding (6259/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | 202753 = | 48 (1.160) | coding (8259/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
TCGAAGGTGTGACCGTCTACATCCACAGCGGACGTGATGCCGAGGCTGATCTGGCCCGCATCCTGATAGACGTCATCGCCTTGCGCGTCGTGGGTGTACGGCGCGCTGGTTTCGCCAGCCTTGATGGTGACCTGAGCGTTGTTGCTCAGGGTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/200907‑200753‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcacCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGTGATGACGTTTACAACGACGCTGGCCAGATCAGCCTGGGCATCACCTCGGCGGTGGACGCCACTGGTGCAACCTTCGAGAACCTGGCGCTGGGCGGTGCC > NC_002947/202753‑202900 TCGAAGGTGTGACCGTCTACATCCACAGCGGACGTGATGCCGAGGCTGATCTGGCCCGCATCCTGATAGACGTCATCGCCTTGCGCGTCGTGGGTGTACGGCGCGCTGGTTTCGCCAGCCTTGATGGTGACCTGAGCGTTGTTGCTCAGG < 1:429717/150‑1TCGAAGGTGTGACCGTCTACATCCACAGCGGACGTGATGCCGAGGCTGATCTGGCCCGCATCCTGATAGACGTCATCGCCTTGCGCGTCGTGGGTGTACGGCGCGCTGGTTTCGCCAGCCTTGATGGTGACCTGAGCGTTGTTGCTCAGG > 1:751483/1‑150 CGAAGGTGTGACCGTCTACATCCACAGCGGACGTGATGCCGAGGCTGATCTGGCCCGCATCCTGATAGACGTCATCGCCTTGCGCGTCGTGGGTGTACGGCGCGCTGGTTTCGCCAGCCTTGATGGTGACCTGAGCGTTGTTGCTCAGGG > 2:655858/1‑150 GTGATGCCGAGGCTGATCTGGCCCGCATCCTGATAGACGTCATCGCCTTGCGCGTCGTGGGTGTACGGCGCGCTGGTTTCGCCAGCCTTGATGGTGACCTGAGCGTTGTTGCTCAGGGTCACCATCAAGGCTGGCGAAACCA > 1:1031125/1‑142 GTGATGCCGAGGCTGATCTGGCCCGCATCCTGATAGACGTCATCGCCTTGCGCGTCGTGGGTGTACGGCGCGCTGGTTTCGCCAGCCTTGATGGTGACCTGAGCGTTGTTGCTCAGGGTCACCATCAAGGCTGGCGAAACCA < 2:1031125/142‑1 TGGTGACCTGGGCGTTGTTGCTCAGGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGCTG > 1:922772/1‑72 TGGTGACCTGGGCGTTGTTGCTCAGGGTCACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGCTG < 2:922772/72‑1 TGGTGACCTGGGCATTGTTGCTCAGGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCGTACACCCACGCTGCGCAGGGCGATGACGTTTACAACGATGCTGGCCAGATCAGCCT > 1:423871/1‑115 TGGTGACCTGGGCATTGTTGCTCAGGGTCACCATCAAGGCCGGCGAGACCAGCGCGCCGTACACCCACGCTGCGCAGGGCGATGACGTTTACAACGATGCTGGCCAGATCAGCCT < 2:423871/115‑1 ACCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGTGATGACGTTTACAACGACGCTGGCCAGATCAGCCTGGGCATCACCTCGGCGGTGGACGCCACTGGTGCAACCTTCGAGAACCTGGCGCTGGGCGGTGCC > 1:1066369/1‑150 TCGAAGGTGTGACCGTCTACATCCACAGCGGACGTGATGCCGAGGCTGATCTGGCCCGCATCCTGATAGACGTCATCGCCTTGCGCGTCGTGGGTGTACGGCGCGCTGGTTTCGCCAGCCTTGATGGTGACCTGAGCGTTGTTGCTCAGGGTCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/200907‑200753‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcacCATCAAGGCCGGCGAAACCAGCGCGCCGTACACCCACGCTGCGCAGGGTGATGACGTTTACAACGACGCTGGCCAGATCAGCCTGGGCATCACCTCGGCGGTGGACGCCACTGGTGCAACCTTCGAGAACCTGGCGCTGGGCGGTGCC > NC_002947/202753‑202900 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |