New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 259838 = | 52 (1.200) | 3 (0.070) | 3/238 | NT | 6.6% | coding (1372/1407 nt) | PP_0207 | nitrate ABC transporter substrate‑binding protein |
? | NC_002947 | 259875 = | 36 (0.890) | intergenic (+2/‑14) | PP_0207/PP_0208 | nitrate ABC transporter substrate‑binding protein/nitrate ABC transporter permease |
GCAGACCAAGGTCCATTTTCACGTTTGCCGCCACTTGCCAGAACAGCAGGCAGGCCAGCAGCGACGCCAGGCGCACCGGCCAGCGCTTGAGGTTGCGGGTCATGTCGGTGCCTCCCGGTCAGCGCTGGGCGACCAGCTTCTGGTTGGCGCTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/259991‑259838 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctgacCGGGAGGCACCGACATGACCCGCAACCTCAAGCGCTGGCCGGTGCGCCTGGCGTCGCTGCTGGCCTGCCTGCTGTTCTGGCAAGTGGCGGCAAACGTGAAAATGGACCTTGGTCTGCTGACGTTCACCTATGTCCCTACACCCAAG > NC_002947/259875‑260020 GCAGACCAAGGTCCATTTTCACGTTTGCCGCCACTTGCCAGAACAGCAGGCAGGCCAGCAGCGACGCCAGGCGCACCGGCCAGCGCTTGAGGTTGCGGGTCATGTCGGTGCCTCCCGGTCAGCGCTGGGCGACCAGCTTCTGGTTGGCGC > 1:121860/1‑150 TCCCGGTCAGCGCTGGGCGACCAGCTTCTGGTTGGCGCTGACCGGGAGGCACCGACATGACCCGCAACCTCAAGCGCTGGCCGGTGCGCCTGGCGTCGCTGCTGGCCTGCCTGCTGTTCTGGCAAGTGGCGGCAAACGTGAAAATGGACC > 2:297766/1‑150 TCAGCGCTGGGCGACCAGCTTCTGGTTGGCGCTGACCGGGAGGCACCGACATGACCCGCAAC > 1:322657/1‑62 TCAGCGCTGGGCGACCAGCTTCTGGTTGGCGCTGACCGGGAGGCACCGACATGACCCGCAAC < 2:322657/62‑1 TGACCGGGAGGCACCGACATGACCCGCAAACTCAAGCGATGGCCGGTGCGCCTGGCGTAGCTGCTGGCCTGCCTGCTGTTCTGGCAAGTTGCGGCAAACGTGAAAATGGACCTTGGTCTGCTGACGTTCACCTATGTCCCTACACCCAAG > 2:971824/1‑150 GCAGACCAAGGTCCATTTTCACGTTTGCCGCCACTTGCCAGAACAGCAGGCAGGCCAGCAGCGACGCCAGGCGCACCGGCCAGCGCTTGAGGTTGCGGGTCATGTCGGTGCCTCCCGGTCAGCGCTGGGCGACCAGCTTCTGGTTGGCGCTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/259991‑259838 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctgacCGGGAGGCACCGACATGACCCGCAACCTCAAGCGCTGGCCGGTGCGCCTGGCGTCGCTGCTGGCCTGCCTGCTGTTCTGGCAAGTGGCGGCAAACGTGAAAATGGACCTTGGTCTGCTGACGTTCACCTATGTCCCTACACCCAAG > NC_002947/259875‑260020 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |