| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 336937 | 48 (1.110) | 4 (0.090) | 4/248 | NT | 8.0% | coding (817/1206 nt) | PP_0279 | hypothetical protein |
| ? | NC_002947 | = 336967 | 45 (1.060) | coding (787/1206 nt) | PP_0279 | hypothetical protein | |||||
TCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/336862‑336937‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcACTGCCGGCGCCCGCGTGCGGCGCCAGCGCGACACCTCGATGGCCCGGCGCCTGGGCTTCGACCTGCTGCAACGCCAGCAGCGCCAGAGCGATGAATACCTGCCGACACCTTCCCTGCCGGTGGCCTGGCTGGAGAAGCCCTTCGAG < NC_002947/336967‑336821 TCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCACTGCCGGCGCCCGCGTGCGGCGCCCGCGCGA > 1:324879/1‑108TCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCACTGCCGGCGCCCGCGTGCGGCGCCAGCGCGA < 2:324879/108‑1 GTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCACTGCCGGCGCCCGCGTGCGGCGCCAGCGCGACACCTC < 1:1001516/107‑1 GTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCACTGCCGGCGCCCGCGTGCGGCGCCAGCGCGACACCTC > 2:1001516/1‑107 GTCACTGCCGGCGCCCGCGTGCGGCGCCAGCGCGACACCTCGATGGCCCGGCGCCTGGGCTTCGACCTGCTGCAACGCCAGCAGCGCCAGAGCGATGAATACCTGCCGACACCTTCCCTGCCGGTGGCCTGGCTGGAGAAGCCCTTCGAG < 1:655930/150‑1 TCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/336862‑336937‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcACTGCCGGCGCCCGCGTGCGGCGCCAGCGCGACACCTCGATGGCCCGGCGCCTGGGCTTCGACCTGCTGCAACGCCAGCAGCGCCAGAGCGATGAATACCTGCCGACACCTTCCCTGCCGGTGGCCTGGCTGGAGAAGCCCTTCGAG < NC_002947/336967‑336821 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |