New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 336937	48 (1.110)	4 (0.090)	4/248	NT	8.0%	coding (817/1206 nt)	PP_0279	hypothetical protein
	?	NC_002947	= 336967	45 (1.060)					coding (787/1206 nt)	PP_0279	hypothetical protein

GCTTCAGTTCAGCCAGGTCACGGCAGTATTGCTCGAAGGGCTTCTCCAGCCAGGCCACCGGCAGGGAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCTGTGGATAACGCCTGGTATTGCTGCGCGGCGATGCGGTTGTAGCAGCAGG  >  NC_002947/336790‑337083                                                                                                                                                    |                                                                                                                                                    gCTTCAGTTCAGCCAGGTCACGGCAGTATTGCTCGAAGGGCTTCTCCAGCCAGGCCACCGGCAGGGAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTcgc                                                                                                                                                   <  1:28725/150‑1 (MQ=255) cggccagttcagCCAGGTCACGGCAGTATTGCTCGAAGGGCTTCTCCAGCCAGGCCACCGGCAGGGAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTcgc                                                                                                                                                   <  1:649225/146‑1 (MQ=255)         tcagCCAGATCACGGCAGTATTGCTCGAAGGGCTTCTCCAGCCAGGCCACCGGCAGGGAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGgcgc                                                                                                                                           <  1:1016936/150‑1 (MQ=255)                 gTCACGGCAGTATTGCTCGAAGGGCTTCTCCAGCCAGGCCACCGGCAGGGAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCAcgcg                                                                                                                                   <  2:812767/150‑1 (MQ=255)                      ggCAGTATTGCTCGAAGGGCTTCTCCAGCCAGGCCACCGGCAGGGAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGgcgc                                                                                                                              >  1:866577/1‑150 (MQ=255)                      ggCAGTATTGCTCGAAGGGCTTCTCCAGCCAGGCCACCGGCAGGGAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGgcgc                                                                                                                              <  1:392343/150‑1 (MQ=255)                                cTCGAAGGGCTTCTCCAGCCAGGCCACCGGCAGGGAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTgac                                                                                                                    <  1:655930‑M2/150‑4 (MQ=255)                                 tCGAAGGGCTTCTCCAGCCAGGCCACCGGCAGGGAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACg                                                                                                                   >  2:504177/1‑150 (MQ=255)                                    aaGGGCTTCTCCAGCCAGGCCACCGGCAGGGAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGtt                                                                                                                <  2:866577/150‑1 (MQ=255)                                       ggCTTCTCCAGCCAGGCCACCGGCAGGGAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCa                                                                                                             <  1:121190/150‑1 (MQ=255)                                           tctcCAGCCAGGCCACCGGCAGGGAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCCGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCa                                                                                                         >  2:112911/1‑150 (MQ=255)                                            ctcCAGCCAGGCCACCGGCAGGGAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCaa                                                                                                        >  2:498126/1‑150 (MQ=255)                                             tcCAGCCAGGCCACCGGCAGGGAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAg                                                                                                       <  2:37338/150‑1 (MQ=255)                                                           cGGCAGGGAATGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGgtc                                                                                         <  1:1059304/150‑1 (MQ=255)                                                           cGGCAGGGAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCCGGCCCAGgtc                                                                                         >  2:456968/1‑150 (MQ=255)                                                                 ggAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAg                                                                                   >  2:690032/1‑150 (MQ=255)                                                                  gAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGc                                                                                  >  2:714249/1‑150 (MQ=255)                                                                    aGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGa                                                                                <  1:690032/150‑1 (MQ=255)                                                                         tCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCactgccggcgcccgcgtgcggcgcccgcgcga                                                                                                                     >  1:324879‑M1/1‑76 (MQ=255)                                                                         tCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCactgccggcgcccgcgtgcggcgccagcgcga                                                                                                                     <  2:324879‑M1/108‑33 (MQ=255)                                                                         tCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCt                                                                           >  1:3484/1‑150 (MQ=255)                                                                                gTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCactgccggcgcccgcgtgcggcgccagcgcgacacctc                                                                                                               >  2:1001516‑M1/1‑69 (MQ=255)                                                                                gTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCactgccggcgcccgcgtgcggcgccagcgcgacacctc                                                                                                               <  1:1001516‑M1/107‑39 (MQ=255)                                                                                   ttCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGcgtcg                                                                 >  2:159405/1‑146 (MQ=255)                                                                                      aTCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCa                                                                                                   >  1:359294/1‑113 (MQ=255)                                                                                      aTCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCa                                                                                                   <  2:359294/113‑1 (MQ=255)                                                                                      aTCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGgt                                                                                          <  1:1032211/122‑1 (MQ=255)                                                                                      aTCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGgt                                                                                          >  2:1032211/1‑122 (MQ=255)                                                                                          ctctGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGCGTCGA‑GCCTgc                                                         <  1:159405/150‑1 (MQ=255)                                                                                             tGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCa                                                                                                                         >  1:506636/1‑84 (MQ=255)                                                                                             tGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCa                                                                                                                         <  2:506636/84‑1 (MQ=255)                                                                                                   tgctgGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAg                                                                             <  2:1084254/122‑1 (MQ=255)                                                                                                   tgctgGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAg                                                                             >  1:1084254/1‑122 (MQ=255)                                                                                                   tgctgGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCtgtg                                                <  1:504177/150‑1 (MQ=255)                                                                                                     cgggCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGGGCTGGCGCCGCACGCGGGCGGCGGCAGTGACGGTTTCACTCAAGGGCAGGGCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCTGTGGa                                              >  2:543998/3‑150 (MQ=255)                                                                                                             gcagcaGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGgtcgtc                                                                                      >  1:455086/1‑103 (MQ=255)                                                                                                             gcagcaGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGgtcgtc                                                                                      <  2:455086/103‑1 (MQ=255)                                                                                                               agcagGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCTGTGGATAACGCCTgg                                    >  2:756547/1‑150 (MQ=255)                                                                                                                gcagGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCTGTGGATAACGCCTGGt                                   >  1:995685/1‑150 (MQ=255)                                                                                                                gcagGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCTGTGGATAACGCCTGGt                                   >  1:115112/1‑150 (MQ=255)                                                                                                                 cagGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCTGTGGATAACGCCTGGTa                                  <  1:1030888/150‑1 (MQ=255)                                                                                                                       gAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCTGTGGATAACGCCTGGTATtgctg                            >  2:685004/1‑150 (MQ=255)                                                                                                                           cccAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCTGTGGATAACGCCTGGTATTGCTGcgcg                        >  1:275152/1‑150 (MQ=255)                                                                                                                            ccAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCTGTGGATAACGCCTg                                     <  1:940916/136‑1 (MQ=255)                                                                                                                            ccAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCTGTGGATAACGCCTg                                     >  2:940916/1‑136 (MQ=255)                                                                                                                            ccAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCTGTGGATAACGCCTGGTATTGCTGCgcgg                       >  1:572780/1‑150 (MQ=255)                                                                                                                             cAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCt                                                                           >  1:224653/1‑98 (MQ=255)                                                                                                                             cAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCt                                                                           <  2:224653/98‑1 (MQ=255)                                                                                                                                     gggCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCTGTGGATAACGCCTGGTATTGCTGCGCGGCGATGCGGt              <  2:995685/150‑1 (MQ=255)                                                                                                                                       gCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGgtcgtc                                                                                      >  2:125269/1‑77 (MQ=255)                                                                                                                                       gCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGgtcgtc                                                                                      <  1:125269/77‑1 (MQ=255)                                                                                                                                         cATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCTGTGGATAACGCCTGGTATTGCTGCGCGGCGATGCGGTTGTa          <  1:456968/150‑1 (MQ=255)                                                                                                                                           tCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCTGTGGATAACGCCTGGTATTGCTGCGCGGCGATGCGGTTGTagc        >  2:588632/1‑150 (MQ=255)                                                                                                                                           tCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCTGTGGATAACGCCTGGTATTGCTGCGCGGCGATGCGGTTGTagc        <  1:330312/150‑1 (MQ=255)                                                                                                                                             gAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTgacacctcgatggcccggcgcctgggcttcgacctgctgcaacgccagcagcgccagagcgatgaatac                                                  >  2:1001516‑M2/1‑38 (MQ=255)                                                                                                                                             gAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTgacacctcgatggcccggcgcctgggcttcgacctgctgcaacgccagcagcgccagagcgatgaatac                                                  <  1:1001516‑M2/107‑70 (MQ=255)                                                                                                                                              aGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCTGTGGATAACGCCTGGTATTGCTGCGCGGCGATGCGGTTGTagcagc     >  1:1126239/1‑150 (MQ=255)                                                                                                                                                  gtCactgccggcgcccgcgtgcggcgccagcgcgacacctcgatggcccggcgcctgggcttcgacctgctgcaacgccagcagcgccagagcgatgaatacctgccgacaccttccctgccggtggcctggctggagaagcccttcgag  <  1:655930‑M1/150‑148 (MQ=255)                                                                                                                                                   tCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTgacacctcgatggcccggcgcctgggcttcgacctgctgcaacgccagcagcgccagagcgatgaatacctgccga                                           <  2:324879‑M2/108‑77 (MQ=255)                                                                                                                                                   tCGCGCGGGCGCCGCACGCGGGCGCCGGCAGTgacacctcgatggcccggcgcctgggcttcgacctgctgcaacgccagcagcgccagagcgatgaatacctgccga                                           >  1:324879‑M2/1‑32 (MQ=255)                                                                                                                                                    |                                                                                                                                                    GCTTCAGTTCAGCCAGGTCACGGCAGTATTGCTCGAAGGGCTTCTCCAGCCAGGCCACCGGCAGGGAAGGTGTCGGCAGGTATTCATCGCTCTGGCGCTGCTGGCGTTGCAGCAGGTCGAAGCCCAGGCGCCGGGCCATCGAGGTGTCGCGCTGGCGCCGCACGCGGGCGCCGGCAGTGACGGTTTCACTCAAGGGCAGGCCCAGGTCGTCCAGCGACAGCTGCAGGC‑TCGACGCCTGCGCGGCTGTGGATAACGCCTGGTATTGCTGCGCGGCGATGCGGTTGTAGCAGCAGG  >  NC_002947/336790‑337083

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.