New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 39598032 (0.740)8 (0.200) 8/236 NT 19.8% intergenic (+159/+45) fdhA/PP_0329 formaldehyde dehydrogenase/hypothetical protein
?NC_002947 = 395987 35 (0.870)intergenic (+166/+38) fdhA/PP_0329 formaldehyde dehydrogenase/hypothetical protein

AGCGTCGAGTAAAAAGAGCCCCTCGCATCGAGGGGCTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/395824‑395980
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtggccct‑TCGCTCC‑AGGGCCACTCACCAGGCTTCGGAACTGATGAGGTATGTGCGGGCGGCGCTCGACTTCAAAAGCGATGAAAGGCTTATGACAAGCACCTCCGGCCGAGATGTCTTATCAGAATGGACAAAAAGCCCCTCGATGCGAGGGGCTC  <  NC_002947/395987‑395839
                                                                                                                                                                                                                                                                                                                    
AGCGTCGAGTAAAAAGAGCCCCTCGCATCGAGGGGCTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAG                                                                                                                                                                >  2:908847/1‑150
   GTCGAGTAAAAAGAGACCCTCGCATCGAGGGGCTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGG                                                                                                                                                             >  2:229980/1‑150
      GAGTAAAAAGAGCCCCTCGCATCGAGGGGCTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTGCCGAAGCCTGGTGAGTGGCCC                                                                                                                                                          >  1:206773/1‑150
                                                                                         TCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCT‑TCGCTCC‑AGGGCCA                                                                                                                                         >  1:35064/1‑82
                                                                                         TCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCT‑TCGCTCC‑AGGGCCA                                                                                                                                         <  2:35064/82‑1
                                                                                                TTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCT‑TCGCTCC‑AGGGCCACTCACCA                                                                                                                                  >  1:560064/1‑82
                                                                                                TTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCT‑TCGCTCC‑AGGGCCACTCACCA                                                                                                                                  <  2:560064/82‑1
                                                                                                                              TCATCAGTTCCGAAGCCTGGTGAGTGGCCCT‑TCGCTCC‑AGGGCCACTCACCAGGCTTCGGAACTGATGAGGTATGTGCGGGCGGCGCTCGACTTCAAAAGCGATGAAAGGCTTATGACAA                                                              >  1:350892/1‑120
                                                                                                                              TCATCAGTTCCGAAGCCTGGTGAGTGGCCCT‑TCGCTCC‑AGGGCCACTCACCAGGCTTCGGAACTGATGAGGTATGTGCGGGCGGCGCTCGACTTCAAAAGCGATGAAAGGCTTATGACAA                                                              <  2:350892/120‑1
                                                                                                                                     TTCCGAAGCCTGGTGGGTGGCCCTGGAGC‑GA‑AGGGCCACTCACCAGGCTTCGGAACTGATGAGGTATGTGCGGGCGGCGCTCGACTTCAAAAGCGATGAAAGGCTTATGACAA                                                              >  1:143949/1‑113
                                                                                                                                     TTCCGAAGCCTGGTGGGTGGCCC‑‑TGGAGCGAAGGGCCACTCACCAGGCTTCGGAACTGATGAGGTATGTGCGGGCGGCGCTCGACTTCAAAAGCGATGAAAGGCTTATGACAA                                                              <  2:143949/113‑1
                                                                                                                                                         CCCT‑TCGCTCC‑AGGGCCACTCACCAGGCTTCGGAACTGATGAGGTATGTGCGGGCGGCGCTCGACTTCAAAAGCGATGAAAGGCTTATGACAAGCACCTCCGGCCGAGATGTCTTATCAGAATGGACAAGAAGCCCCTCGATGCGAGGGG     <  1:563758/150‑1
                                                                                                                                                          CCT‑TCGCTCC‑AGGGCCACTCACCAGGCTTCGGAACTGATGAGGTATGTGCGGGCGGCGCTCGACTTCAAAAGCGATGAAAGGCTTATGACAAGCACCTCCGGCCGAGATGTCTTATCAGAATGGACAAAAAGCCCCTCGATGCGAGGGGC    >  2:381139/1‑150
                                                                                                                                                            T‑TCGCTCC‑AGGGCCACTCACCAGGCTTCGGAACTGATGAGGTATGTGCGGGCGGCGCTCGACTTCAAAAGCGATGAAAGGCTTATGACAAGCACCTCCGGCCGAGATGTCTTATCAGAATGGACAAAAAGCCCCTCGATGCGAGGGGCTC  >  1:360440/1‑150
                                                                                                                                                                                                                                                                                                                    
AGCGTCGAGTAAAAAGAGCCCCTCGCATCGAGGGGCTTTTTGTCCATTCTGATAAGACATCTCGGCCGGAGGTGCTTGTCATAAGCCTTTCATCGCTTTTGAAGTCGAGCGCCGCCCGCACATACCTCATCAGTTCCGAAGCCTGGTGAGTGGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/395824‑395980
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agtggccct‑TCGCTCC‑AGGGCCACTCACCAGGCTTCGGAACTGATGAGGTATGTGCGGGCGGCGCTCGACTTCAAAAGCGATGAAAGGCTTATGACAAGCACCTCCGGCCGAGATGTCTTATCAGAATGGACAAAAAGCCCCTCGATGCGAGGGGCTC  <  NC_002947/395987‑395839

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.