| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 479162 = | 43 (0.990) | 4 (0.100) | 4/244 | NT | 8.4% | coding (310/1107 nt) | cca | multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase |
| ? | NC_002947 | 479206 = | 46 (1.110) | coding (266/1107 nt) | cca | multifunctional tRNA nucleotidyltransferase/2',3'‑cyclic phosphodiesterase/2' nucleotidase/phosphatase | |||||
AAACCGGTGAGGAATACGCCCTGGCGCGCACCGAGCGCAAGAGTGGGCGAGGCTACGGCGGGTTCACTTTTCACGCCAGCCCCGACGTAACCCTGGAAGAAGACCTGATCCGCCGCGACCTCACCATCAATGCGATGGCCGAGGATGAGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/479314‑479162‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggATCAGGTCTTCTTCCAGGGTTACGTCGGGGCTGGCGTGAAAAGTGAACCCGCCGTAGCCTCGCCCACTCTTGCGCTCGGTGCGCGCCAGGGCGTATTCCTCACCGGTTTTCGGGTGCAGGAACAC > NC_002947/479206‑479330 AAACCGGTGAGGAATACGCCCTGGCGCGCACCGAGCGCAAGAGTGGGCGAGGCTACGGCGGGTTCACTTTTCACGCCAGCCCCGACGTAACCCTGGAAGAAGACCTGATCCGCCGCGACCTCACCATCAATGCGATGGCCGAGGATGAGG < 2:664723/150‑1 CCGGTGAGGAATACGCCCTGGCGCGCACCGAGCGCAAGAGTGGGCGAGGCTACGGCGGGTTCACTTTTCACGCCAGCCCCGACGTAACCCTGGAAGAAGACCTGATCCGCCGCGACCTCACCATCAATGCGATGGCCGAGGATGAGGCGG < 2:1022040/150‑1 CCGGTGAGGAATACGCCCTGGCGCGCACCGAGCGCAAGAGTGGGCGAGGCTACGGCGGGTTCACTTTTCACGCCAGCCCCGACGTAACCCTGGAAGAAGACCTGAACCGCCGCGACCTCACCATCAATGCGATGGCCGAGGATGAGGCGG > 1:674229/1‑150 ACCTGATCCGCCGCGACCTCACCATCAATGCGATGGCCGAGGATGAGGCGGATCAGGTCTTCTTCCAGGGTTACGTCGGGGCTGGCGTGAAAAGTGAACCCGCCGTAGCCTCGCCCACTCTTGCG < 1:508075/125‑1 ACCTGATCCGCCGCGACCTCACCATCAATGCGATGGCCGAGGATGAGGCGGATCAGGTCTTCTTCCAGGGTTACGTCGGGGCTGGCGTGAAAAGTGAACCCGCCGTAGCCTCGCCCACTCTTGCG > 2:508075/1‑125 TGATCCGCCGCGACCTCACCATCAATGCGATGGCCGAGGATGAGGCGGATCAGGTCTTCTTCCAGGGTTACGTCGGGGCTGGCGTGAAAAGTGAACCCGCCGTAGCCTCGCCCACTCTTGCGCTCGGTGCGCGCCAGGGCGTATTCCTCA > 1:774407/1‑150 AATGCGATGGCCGAGGATGAGGCGGATCAGGTCTTCTTCCAGGGTTACGTCGGGGCTGGCGTGAAAAGTGAACCCGCCGTAGCCTCGCCCACTCTTGCGCTCGGTGCGCGCCAGGGCGTATTCCTCACCGGTTTTCGGGTGCAGGAACAC < 2:774407/150‑1 GATCAGGTCTTCTTCCAGGGTTACGTCGGGGCTGGCGTGAAAAGTGAACCCGCCGTAGCCTCGCCCACTCTTGCGCTCGGTGCGCGCCAGGGCGTATTCCTCACCGGTT > 1:650917/1‑109 GATCAGGTCTTCTTCCAGGGTTACGTCGGGGCTGGCGTGAAAAGTGAACCCGCCGTAGCCTCGCCCACTCTTGCGCTCGGTGCGCGCCAGGGCGTATTCCTCACCGGTT < 2:650917/109‑1 AAACCGGTGAGGAATACGCCCTGGCGCGCACCGAGCGCAAGAGTGGGCGAGGCTACGGCGGGTTCACTTTTCACGCCAGCCCCGACGTAACCCTGGAAGAAGACCTGATCCGCCGCGACCTCACCATCAATGCGATGGCCGAGGATGAGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/479314‑479162‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggATCAGGTCTTCTTCCAGGGTTACGTCGGGGCTGGCGTGAAAAGTGAACCCGCCGTAGCCTCGCCCACTCTTGCGCTCGGTGCGCGCCAGGGCGTATTCCTCACCGGTTTTCGGGTGCAGGAACAC > NC_002947/479206‑479330 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |