New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 823176	54 (1.250)	3 (0.080) +GGCACCGGCTCTGCCGGTG	3/216	NT	5.9%	coding (1431/1431 nt)	PP_0708	betaine‑aldehyde dehydrogenase
	?	NC_002947	1456002 =	59 (1.360)					intergenic (+74/+175)	PP_1273/PP_1274	multidrug MFS transporter outer membrane protein/short‑chain dehydrogenase/reductase family oxidoreductase

CGGTGCCATAACGCGACCCCTTGCGATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/823148‑823176 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCGCGGGTGAACCCGCTCCTACAGCGGCCTGTGTCCAACCACCGATGTGTGTCC  >  NC_002947/1456002‑1456056                              |||||||||||||||||||                                                        CGGTGCCATAACGCGACCCCTTGCGATATGGCACCGGCTCTGCCGGTGTTCGCGGGTAAACCCGTTCCTACAGCGGCCTGTGTCCAAACTCCGGTGTGTGTCC  <  1:316680/103‑1 CGGTGCCATAACGCGACCCCTTGCGATATGGCACCGGCTCTGCCGGTGTTCGCGGGTAAACCCGTTCCTACAGCGGCCTGTGTCCAAACTCCGGTGTGTGTCC  >  2:316680/1‑103       CATAACGCGACCCCTTGCGATATGGCACCGGCTCTGCCGGTGTTCGCGGGTAAACCCGTTCCTACAGCGGCCTGTGTCCAAACTCCGg           >  2:505597/1‑87                              |||||||||||||||||||                                                        CGGTGCCATAACGCGACCCCTTGCGATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/823148‑823176 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCGCGGGTGAACCCGCTCCTACAGCGGCCTGTGTCCAACCACCGATGTGTGTCC  >  NC_002947/1456002‑1456056

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.