New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1332458 | 38 (0.880) | 4 (0.100) | 4/236 | NT | 10.6% | intergenic (+33/‑1223) | PP_1157/PP_1159 | acetolactate synthase/membrane protein |
? | NC_002947 | = 1332481 | 32 (0.800) | intergenic (+56/‑1200) | PP_1157/PP_1159 | acetolactate synthase/membrane protein |
GCTGCTGGAGCACTGCATCAAGACCCCAGGTGTGCACGTGATCGACTGCCCGGTCGATTACAGCGAGAACGACCGCATCCTCAACAGCGAGCTGCGTGAGCGCGCGCTGGCGGTGTAAGGCCTAACGACCTTATCGCAGTAAGCCGGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1332308‑1332458 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcaccTACAGG‑ATCGTGTGATACCTGTGGGTGCCGGCTTACTGCGATAAGGTCGTTAGGCCTTACACCGCCAGCGCGCGCTCACGCAGCTCGCTGTTGAGGATGCGGTCGTTCTCGCTGTAATCGACCGGGCAGTCGATCACGTGCACACCTGG < NC_002947/1332481‑1332333 GCTGCTGGAGCACTGCATCAAGACCCCAGGTGTGCACGTGATCGACTGCCCGGTCGATTACAGCGAGAACTACCGCATCCTCAACAGCGAGCTGCGTGAGCGCGCGCTGGCGGTGTAAGGCCTAACGACCTAATCGCAGAAAGCAGTCAC > 2:307701/1‑150 TGCATCAAGACCCCAGGTGTGCACGTGATCGACTGCCCGGTCGATTACAGCGAGAACGACCGCATCCTCAACAGCGAGCTGCGTGAGCGCGCGCTGGCGGTGTAAGGCCTAACGACCTTATCGCAGTAAGCCGGCACCTACAGG‑ATCGTG < 1:384606/150‑1 CTTATCGCAGTAAGCCGGCACCCACAGGTATCACACGAT‑CCTGTAGGTGCCGGCTTACTGCGATAAGGTCGTTAGGCCTTACACCGCCAGCGCGCGCTCACGCAGCTCGCTGTTGAGGATGCGGTCGTTCTCGCTGTAATCGACCGGGCA > 1:116511/1‑150 TCGCAGTAAGCCGGCACCCACAGGTATCACACGAT‑CCTGTAGGTGCCGGCTTACTGCGATAAGGTCGTTAGGCCTTACACCGCCAGCGCGCGCTCACGCAGCTCGCTGTTGAGGATGCGGTCGTTCTCGCTGTAAT < 1:119118/136‑1 TCGCAGTAAGCCGGCACCCACAGGTATCACACGAT‑CCTGTAGGTGCCGGCTTACTGCGATAAGGTCGTTAGGCCTTACACCGCCAGCGCGCGCTCACGCAGCTCGCTGTTGAGGATGCGGTCGTTCTCGCTGTAAT > 2:119118/1‑136 CTACAGG‑ATCGTGTGATACCTGTGGGTGCCGGCTTACTGCGATAAGGTCGTTAGGCCTTACACCGCCAGCGCGCGCTCACGCAGCTCGCTGTTGAGGATGCGGTCGTTCTCGCTGTAATCGACCGGGCAGTCGATCACGTGCACACCTGG < 2:1038097/150‑1 CTACAGG‑ATCGTGTGATACCTGTGGGTGCCGGCTTACTGCGATAAGGTCGTTAGGCCTTACACCGCCAGCGCGCGCTCACGCAGCTCGCTGTTGAGGATGCGGTCGTTCTCGCTGTAATCGACCGGGCAGTCGATCACGTGCACACCTGG > 2:240323/1‑150 GCTGCTGGAGCACTGCATCAAGACCCCAGGTGTGCACGTGATCGACTGCCCGGTCGATTACAGCGAGAACGACCGCATCCTCAACAGCGAGCTGCGTGAGCGCGCGCTGGCGGTGTAAGGCCTAACGACCTTATCGCAGTAAGCCGGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1332308‑1332458 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcaccTACAGG‑ATCGTGTGATACCTGTGGGTGCCGGCTTACTGCGATAAGGTCGTTAGGCCTTACACCGCCAGCGCGCGCTCACGCAGCTCGCTGTTGAGGATGCGGTCGTTCTCGCTGTAATCGACCGGGCAGTCGATCACGTGCACACCTGG < NC_002947/1332481‑1332333 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |