New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2281445 = | 45 (1.040) | 3 (0.070) | 3/240 | NT | 7.1% | coding (224/894 nt) | PP_2009 | 1‑aminocyclopropane‑1‑carboxylate deaminase |
? | NC_002947 | 2281500 = | 36 (0.880) | coding (279/894 nt) | PP_2009 | 1‑aminocyclopropane‑1‑carboxylate deaminase |
GAAGCCGGGTTCGTTGCGTGCACGGTAGCCGCCGTAGCCTAGCCAATGCAGTTCCATGCCCAGCGCCTGCAGGTCACGCACGGTTGGCGTGTCCTGGGCATGGCCGCGTAACAGGCCGACGGTGGCGAAGCCGAAACGCTTGCCGGCAGCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2281599‑2281445 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccaTGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAA > NC_002947/2281500‑2281647 GAAGCCGGGTTCGTTGCGTGCACGGTAGCCGCCGTAGCCTAGCCAATGCAGTTCCATGCCCAGCGCCTGCAGGTCACGCACGGTTGGCGTGTCCTGGGCATGGCCGCGTAACAGGCCGACGGTGGCGAAGCCGAAACGCTTGCCGGCAGC > 2:658978/1‑150 CATGGCCGCGTAACAGGCCGACGGTGGCGAAGCCGAAACGCTTGCCGGCAGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCA < 1:532847/139‑1 CATGGCCGCGTAACAGGCCGACGGTGGCGAAGCCGAAACGCTTGCCGGCAGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCA > 2:532847/1‑139 TGGCCGCGTAACAGGCCGACGGTGGCGAAGCCGAAACGCTTGCCGGCAGCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCG > 2:419720/1‑150 GCGGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCCCTGCATCC > 1:511328/1‑150 CCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGA > 1:1111339/1‑150 CATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGATACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCGCCGAA > 1:325047/1‑150 GAAGCCGGGTTCGTTGCGTGCACGGTAGCCGCCGTAGCCTAGCCAATGCAGTTCCATGCCCAGCGCCTGCAGGTCACGCACGGTTGGCGTGTCCTGGGCATGGCCGCGTAACAGGCCGACGGTGGCGAAGCCGAAACGCTTGCCGGCAGCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2281599‑2281445 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggccaTGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCCGGCTTCTGGGAACCTTGGCAAGCGCGCTATCCAGGCTGGCACTGCATCCCCGAA > NC_002947/2281500‑2281647 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |