New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2281445 =	45 (1.040)	3 (0.070)	3/240	NT	7.1%	coding (224/894 nt)	PP_2009	1‑aminocyclopropane‑1‑carboxylate deaminase
	?	NC_002947	2281500 =	36 (0.880)					coding (279/894 nt)	PP_2009	1‑aminocyclopropane‑1‑carboxylate deaminase

GCCGCCACTCTGCGCCTGGACCTGATCGACCCGCTGATCAGCGGCAACAAGTGGTTCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCC  >  NC_002947/2281297‑2281593                                                                                                                                                     |                                                                                                                                                      ttcggcgatgcagtgccagcctggatagcgcgcttgccaaggttcccagaagccgggttcgttgcgtgcacggtatccgccgtagcctagccaatgcagttccatgcccagcgcctgcaggtcacgcacggttggcgtgtcctgggcaTg                                                                                                                                                      >  1:325047‑M1/149‑150 (MQ=255)  tcggggatgcagtgccagcctggatagcgcgcttgccaaggttcccagaagccgggttcgttgcgtgcacggtagccgccgtagcctagccaatgcagttccatgcccagcgcctgcaggtcacgcacggttggcgtgtcctgggcaTgg                                                                                                                                                     >  1:1111339‑M1/148‑150 (MQ=255)   cgccACTCTGCGCCTGGACCTGATCGACCCGCTGATCAGCGGCAACAAGTGGTTCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGc                                                                                                                                                    >  2:619963/1‑150 (MQ=255)      ggatgcagggccagcctggatagcgcgcttgccaaggttcccagaagccgggttcgttgcgtgcacggtagccgccgtagcctagccaatgcagttccatgcccagcgcctgcaggtcacgcacggttggcgtgtcctgggcaTGGCCGc                                                                                                                                                 >  1:511328‑M1/144‑150 (MQ=255)        ctctGCGCCTGGACCTGATCGACCCGCTGATCAGCGGCAACAAGTGGTTCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTg                                                                                                                                               >  2:79365/1‑150 (MQ=255)                 tGGACCTGATCGACCCGCTGATCAGCGGCAACAAGTGGTTCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGc                                                                                                                                      <  1:929480/150‑1 (MQ=255)                         aTCGACCCGCTGATCAGCGGCAACAAGTGGATCAAACTACGCGACCACCTGCAAGAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGc                                                                                                                              >  2:320412/1‑150 (MQ=255)                                        aGCGGCAACAAGTGGTTCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGc                                                                                                               <  1:79365/150‑1 (MQ=255)                                          cGGCAACAAGTGGTTCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCt                                                                                                             <  2:1000709/150‑1 (MQ=255)                                             caacaaGTGGTTCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGtt                                                                                                          <  2:512726/150‑1 (MQ=255)                                                 aaGTGGTTCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTAcgc                                                                                                      >  1:563040/1‑150 (MQ=255)                                                    tGGTTCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGttt                                                                                                                                  <  1:1083608/119‑1 (MQ=255)                                                    tGGTTCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGttt                                                                                                                                  >  2:1083608/1‑119 (MQ=255)                                                    tGGGTCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCACCCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑Gc                                                                                                  <  2:190497/150‑1 (MQ=255)                                                     ggTTCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCCACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTg                                                                                                            <  2:910184/140‑1 (MQ=255)                                                     ggTTCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTg                                                                                                            >  1:910184/1‑140 (MQ=255)                                                      cgggttcgttgcgtgcacggtagccgccgtagcctagccaatgcagttccatgcccagcgcctgcaggtcacgcacggttggcgtgtcctgggcaTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCa                                                                                                >  2:419720‑M1/96‑150 (MQ=255)                                                        tCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATg                                                                                              <  1:75402/150‑1 (MQ=255)                                                           aaCTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGCTCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGccc                                                                                           >  2:1002004/1‑150 (MQ=255)                                                           aaCTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGccc                                                                                           >  2:1002122/1‑150 (MQ=255)                                                             cTACGCCACCACCTGCAACAGGCGGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGTCACCGTCGGCCTGTTACGCG‑GCCATGCCCAg                                                                                         <  2:208878/150‑1 (MQ=255)                                                                  ccactaCCTGCAACAGGCCGGCGCAAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAAGCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCCTGCCCACGacac                                                                                    >  2:470524/1‑150 (MQ=255)                                                                   tgcacggtagccgccgtagcctagccaatgcagttccatgcccagcgcctgcaggtcacgcacggttggcgtgtcctgggcaTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATg                                                                                              >  2:532847‑M1/83‑139 (MQ=255)                                                                   tgcacggtagccgccgtagcctagccaatgcagttccatgcccagcgcctgcaggtcacgcacggttggcgtgtcctgggcaTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATg                                                                                              <  1:532847‑M1/57‑1 (MQ=255)                                                                   caccacCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑Gc                                                                                                  <  1:707182/135‑1 (MQ=255)                                                                   caccacCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑Gc                                                                                                  >  2:707182/1‑135 (MQ=255)                                                                       accTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCaa                                                                               >  1:1109109/1‑150 (MQ=255)                                                                               cAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACCCCTTCGTCACGGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACcgtgcgt                                                                       <  1:411105/150‑1 (MQ=255)                                                                                  gCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGAc                                                                    <  2:209506/150‑1 (MQ=255)                                                                                             cAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCt                                                         <  1:780175/150‑1 (MQ=255)                                                                                                 gCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGc                                                     >  1:354897/1‑150 (MQ=255)                                                                                                   tCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTATAAGCTTCGCCACCTTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCAt                                                   >  1:688950/1‑150 (MQ=255)                                                                                                     cAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATgg                                                 >  1:945917/1‑150 (MQ=255)                                                                                                       ggCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGaa                                               <  2:354897/150‑1 (MQ=255)                                                                                                        gCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAAc                                              >  2:837568/1‑150 (MQ=255)                                                                                                         ccTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCGTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACt                                             >  2:770389/1‑150 (MQ=255)                                                                                                           tGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGc                                           <  1:677205/150‑1 (MQ=255)                                                                                                                    tCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGGCCTGCAGGCGCTGGGCATGGAACTGCATTggctag                                  <  1:1002004/150‑1 (MQ=255)                                                                                                                    tCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTggctag                                  <  1:1002122/150‑1 (MQ=255)                                                                                                                        cggTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTggctaggcta                              >  2:977296/1‑150 (MQ=255)                                                                                                                          gTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTAcg                            >  1:589827/1‑150 (MQ=255)                                                                                                                          gTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTAcg                            >  1:210364/1‑150 (MQ=255)                                                                                                                              ccATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGc                                                                                                               >  2:219929/1‑64 (MQ=255)                                                                                                                              ccATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGc                                                                                                               <  1:219929/64‑1 (MQ=255)                                                                                                                               cATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACggcggc                       >  1:658978/1‑150 (MQ=255)                                                                                                                               cATTCCAACCATCGGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGG‑CTCCTCCGCGCGCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACggcggc                       <  1:619963/150‑1 (MQ=255)                                                                                                                                     aaCCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGt                 >  2:102189/1‑150 (MQ=255)                                                                                                                                     aaCCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGt                 >  2:425719/1‑150 (MQ=255)                                                                                                                                     aaCCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGt                 >  1:784726/1‑150 (MQ=255)                                                                                                                                     aaCCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGt                 >  2:837562/1‑150 (MQ=255)                                                                                                                                              cACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCa                                                    <  2:1028134/106‑1 (MQ=255)                                                                                                                                              cACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCa                                                    >  1:1028134/1‑106 (MQ=255)                                                                                                                                                 gCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACAGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGaa     <  1:1081743/150‑1 (MQ=255)                                                                                                                                                    ttGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAAccc  >  1:314497/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                      GCCGCCACTCTGCGCCTGGACCTGATCGACCCGCTGATCAGCGGCAACAAGTGGTTCAAACTACGCCACCACCTGCAACAGGCCGGCGCCAGCAACGCTCCAGGCCTGATCAGCCTCGGCGGTAACCATTCCAACCATCTGCACGCCTTGGCCGCTGCCGGCAAGCGTTTCGGCTTCGCCACCGTCGGCCTGTTACGCG‑GCCATGCCCAGGACACGCCAACCGTGCGTGACCTGCAGGCGCTGGGCATGGAACTGCATTGGCTAGGCTACGGCGGCTACCGTGCACGCAACGAACCC  >  NC_002947/2281297‑2281593

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.