New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2443134 | 36 (0.830) | 4 (0.100) | 4/246 | NT | 10.3% | coding (2229/2610 nt) | topA | DNA topoisomerase I |
? | NC_002947 | = 2443155 | 35 (0.830) | coding (2250/2610 nt) | topA | DNA topoisomerase I |
AAGGCAACTACCGCATCAAGGGTTACGAAGGGCCGAGCCTGGAGTGCGACAAGTGCGGTAGCGAGATGCAATTGAAGACCGGCCGTTTCGGCAAGTTCTTCGGCTGCACCAACCCGGCGTGCAAGAACACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2443001‑2443134 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcCTCGCCGCTCTTGAGCAGCTTGCGGGTGTTCTTGCA < NC_002947/2443155‑2443120 AAGGCAACTACCGCATCAAGGGTTACGAAGGGCCGAGCCTGGAGTGCGACAAGTGCGGTAGCGAGATGCAATTGAAGACCGGCCGTTTCGGCAAGTTCTTCGGCTGCACCAACCCGGCGTGCAAGAACACCCGCCTCGCCGCTCTTGAGC > 1:667586/1‑150 GGTTACGAAGGGCCGAGCCTGGAGTGCGACAAGTGCGGTAGCGAGATGCAATTGAAGACCGGCCGTTTCGGCAAGTTCTTCGGCTGCACCAACCCGGCGTGCAAGAACACCCGCCTCGCCGCTCTTGAGCAGCTTGCGGGTGTTCTTGCA < 2:667586/150‑1 CCGAGCCTGGAGTGCGACAAGTGCGGTAGCGAGATGCAATTGAAGACCGGCCGTTTCGGCAAGTTCTTCGGCTGCACCAACCCGGCGTGCAAGAACACCCGCCTCGCCGCTCTTGAGCAGCTTGCGGGT > 1:946544/1‑129 CCGAGCCTGGAGTGCGACAAGTGCGGTAGCGAGATGCAATTGAAGACCGGCCGTTTCGGCAAGTTCTTCGGCTGCACCAACCCGGCGTGCAAGAACACCCGCCTCGCCGCTCTTGAGCAGCTTGCGGGT < 2:946544/129‑1 AAGGCAACTACCGCATCAAGGGTTACGAAGGGCCGAGCCTGGAGTGCGACAAGTGCGGTAGCGAGATGCAATTGAAGACCGGCCGTTTCGGCAAGTTCTTCGGCTGCACCAACCCGGCGTGCAAGAACACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2443001‑2443134 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcCTCGCCGCTCTTGAGCAGCTTGCGGGTGTTCTTGCA < NC_002947/2443155‑2443120 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |