| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2871116 = | 34 (0.780) | 4 (0.100) | 4/242 | NT | 11.4% | intergenic (+380/‑150) | PP_2522/PP_2524 | transposase/HD domain‑containing protein |
| ? | NC_002947 | 2871157 = | 30 (0.730) | intergenic (+421/‑109) | PP_2522/PP_2524 | transposase/HD domain‑containing protein | |||||
ACTGGCAGGAGCAGCCTTGTGTGCGATGGGGATGTTACTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2871158‑2871116‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccaGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAAC > NC_002947/2871157‑2871232 ACTGGCAGGAGCAGCCTTGTGTGCGATGGGGATGTTACTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAAC < 1:195706/119‑1ACTGGCAGGAGCAGCCTTGTGTGCGATGGGGATGTTACTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAAC > 2:195706/1‑119 CCTTGTGTGCGATGGGGATGTTACTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTC < 1:859674/66‑1 CCTTGTGTGCGATGGGGATGTTACTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTC > 2:859674/1‑66 ACTGGCAGGAGCAGCCTTGTGTGCGATGGGGATGTTACTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2871158‑2871116‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgccaGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAAC > NC_002947/2871157‑2871232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |