| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2871116 = | 34 (0.780) | 4 (0.100) | 4/242 | NT | 11.4% | intergenic (+380/‑150) | PP_2522/PP_2524 | transposase/HD domain‑containing protein |
| ? | NC_002947 | 2871157 = | 30 (0.730) | intergenic (+421/‑109) | PP_2522/PP_2524 | transposase/HD domain‑containing protein | |||||
GGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCAGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCACCGGAAATGGAACCTACCGAAGATGACCCGCGAAGCGTTTGCTCCTTATCAGTGC > NC_002947/2871014‑2871298 | gggTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCAGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGt < 2:532260/150‑1 (MQ=255) cATTTTCTGATATCTCGCACCTGCTGTCAGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGa < 2:78562/150‑1 (MQ=255) cATTTTCTGATATCTCGCACCTGCTGTCAGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGa < 1:37045/150‑1 (MQ=255) ttttCTGATATCTCGCACCTGCTGTCCGCAAGGTGCTGTCGGTATACTGACTTCCCATCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACa < 2:29452/150‑1 (MQ=255) cTGATATCTCGCACCTGCTGTCAGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCa > 2:810081/1‑150 (MQ=255) tGATATCTCGCACCTGCTGTCAGCAAGGTGCTGTCGGTGATGTCTAGCCCGTTCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAg < 1:346229/150‑1 (MQ=255) gttcacgggcgccgtccggacactgcctgggcaagtacagagagcctgcatgtcggtttcaacgcctgtacagcacTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGt > 2:195706‑M1/77‑119 (MQ=255) gttcacgggcgccgtccggacactgcctgggcaagtacagagagcctgcatgtcggtttcaacgcctgtacagcacTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGt < 1:195706‑M1/43‑1 (MQ=255) tcGCACCTGCTGTGAGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGGCTTGTTTTTTTATCAGTAACATCCCCATCGCACACAAGGATGCTAATGTTAGCGCTGTACAGGCGTTGAAACCGACATGCAGGctctct < 1:810081/150‑1 (MQ=255) caccttgctgACAGC‑AGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGtt < 2:337913/120‑1 (MQ=255) caccttgctgACAGC‑AGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGtt > 1:337913/6‑125 (MQ=255) gctgTCAGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCCTCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGc < 2:183105/150‑1 (MQ=255) gTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGAc < 2:404496/150‑1 (MQ=255) tcACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTg < 1:828106/120‑1 (MQ=255) tcACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTg > 2:828106/1‑120 (MQ=255) tcACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGaa > 1:601141/1‑150 (MQ=255) tcACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGaa < 1:385598/150‑1 (MQ=255) cccAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGt > 2:46744/1‑73 (MQ=255) cccAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGt < 1:46744/73‑1 (MQ=255) cccAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCcg > 1:954137/1‑150 (MQ=255) cccATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCa > 1:223109/1‑150 (MQ=255) ccATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCAc > 2:197309/1‑150 (MQ=255) cATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCAcc > 2:46361/1‑150 (MQ=255) tGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGAc < 1:875799/79‑1 (MQ=255) tGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGAc > 2:875799/1‑79 (MQ=255) gCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCt < 2:908267/50‑1 (MQ=255) gCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCt > 1:908267/1‑50 (MQ=255) cTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCACCg > 1:807399/1‑133 (MQ=255) cTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCACCg < 2:807399/133‑1 (MQ=255) actggcaggagcagccttgtgtgcgatggggatgttactgccaGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAAc > 2:195706‑M2/44‑119 (MQ=255) actggcaggagcagccttgtgtgcgatggggatgttactgccaGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAAc < 1:195706‑M2/76‑1 (MQ=255) ccttgtgtgcgatggggatgttactgccaGTGCTGTACAGGCGTTGAAACCGACATGCAGGctctc < 1:859674‑M2/37‑1 (MQ=255) ccttgtgtgcgatggggatgttactgccaGTGCTGTACAGGCGTTGAAACCGACATGCAGGctctc > 2:859674‑M2/30‑66 (MQ=255) ccccATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCACCGGAAATGGAACCTACCGAAGATGACCCGCGaa < 1:46361/150‑1 (MQ=255) gCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCACCGGAAATGGAACCTACCGAAGATGACCCGCGaa > 2:335667/1‑143 (MQ=255) gCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCACCGGAAATGGAACCTACCGAAGATGACCCGCGAAGCGTTTg < 1:730612/150‑1 (MQ=255) gCACACAAGGATGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCACCGGAAATGGAACCTACCGAAGATGACCCGCGaa < 1:335667/143‑1 (MQ=255) acacaAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTATCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCACCGGAAATGGAACCTACCGAAGATGACCCGCGAAGCGTTTGCt > 1:611567/1‑150 (MQ=255) cacaAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCACCGGAAATGGAACCTACCGAAGATGACCCGCGAAGCGTTTGCTc < 2:223109/150‑1 (MQ=255) cacaAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCACCGGAAATGGAACCTACCGAAGATGACCCGCGAAGCGTTTGCTc < 1:930916/150‑1 (MQ=255) tCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCACCGGAAATGGAACCTACCGAAGATGACCCGCGAAGCGTTTGCTCCTTATCAGTGc > 2:289566/1‑150 (MQ=255) | GGGTATCCGGCGTTGTCCATTTTCTGATATCTCGCACCTGCTGTCAGCAAGGTGCTGTCGGTGATGTCTCACCCCAGCACCCCATAGGCTGAAGACATGCCTTGGCAGTAACATCCCCATCGCACACAAGGCTGCTCCTGCCAGTGCTGTACAGGCGTTGAAACCGACATGCAGGCTCTCTGTACTTGCCCAGGCAGTGTCCGGACGGCGCCCGTGAACCCGCGCATTCACCGGAAATGGAACCTACCGAAGATGACCCGCGAAGCGTTTGCTCCTTATCAGTGC > NC_002947/2871014‑2871298 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |