New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3121091 | 39 (0.900) | 3 (0.070) | 3/246 | NT | 7.2% | coding (396/753 nt) | PP_2737 | short‑chain dehydrogenase/reductase family oxidoreductase |
? | NC_002947 | = 3121106 | 39 (0.930) | coding (381/753 nt) | PP_2737 | short‑chain dehydrogenase/reductase family oxidoreductase |
CCTGGGCTCACCAGGGTGACCGCGATGCCTTCGCGGGCCAGGTCGATTCGCTGTGACTCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3120954‑3121091 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccCCACCTGGTGGTGATGGGCAGTTCGGTAACCTGGCTGGCCTTGCCCCGCGCTGGCGCCTATGGGGCGTCCAAGGCCGCAGTGCGCTATCTGGTGGAGTCACAGCGAATCGACCTGGCCCGCGAAGGCATCGCGGTCACCCTGGTGAGC < NC_002947/3121106‑3120959 CCTGGGCTCACCAGGGTGACCGCGATGCCTTCGCGGGCCAGGTCTATTCGCTGTGACTCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCC < 1:755924/138‑1 CCTGGGCTCACCAGGGTGACCGCGATGCCTTCGCGGGCCAGGTCTATTCGCTGTGACTCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCC > 2:755924/1‑138 TCGCGGGCCAGGTCGATTCGCTGTGACTCAACACCCACGCCCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGATAGGCCAGCCAGGTTACCGAACTGCCCCCACCTGGTGGTGATGGGCAGTTCGGTAACCTGGCTGGCCTT < 2:640926/150‑1 GGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCCCACCTGGTGGTGATGGGC > 1:303486/1‑80 GGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCCCCACCTGGTGGTGATGGGC < 2:303486/80‑1 GCCCCCACCTGGTGGTGATGGGCAGTTCGGTAACCTGGCTGGCCTTGCCCCGCGCTGGCGCCTATGGGGCGTCCAAGGCCGCAGTGCGCTATCTGGTGGAGTCACAGCGAATCGACCTGGCCCGCGAAGGCATCGCGGTCACCCTGGTGA < 2:1046867/150‑1 CCCCACCTGGTGGTGATGGGCAGTTCGGTAACCTGGCTGGCCTTGCCCCGCGCTGGCGCCTATGGGGCGTCCAAGGCCGCAGTGCGCTATCTGGTGGAGTCACAGCGAATCGACCTGGCCCGCGAAGGCATCGCGGTCACCCTGGTGAGC > 1:92276/1‑150 CCTGGGCTCACCAGGGTGACCGCGATGCCTTCGCGGGCCAGGTCGATTCGCTGTGACTCCACCAGATAGCGCACTGCGGCCTTGGACGCCCCATAGGCGCCAGCGCGGGGCAAGGCCAGCCAGGTTACCGAACTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3120954‑3121091 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccCCACCTGGTGGTGATGGGCAGTTCGGTAACCTGGCTGGCCTTGCCCCGCGCTGGCGCCTATGGGGCGTCCAAGGCCGCAGTGCGCTATCTGGTGGAGTCACAGCGAATCGACCTGGCCCGCGAAGGCATCGCGGTCACCCTGGTGAGC < NC_002947/3121106‑3120959 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |