New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3516639 = | 38 (0.880) | 3 (0.070) | 6/244 | NT | 7.3% | intergenic (+636/‑499) | PP_5576/PP_5578 | hypothetical protein/hypothetical protein |
? | NC_002947 | 3516657 = | 40 (0.960) | intergenic (+654/‑481) | PP_5576/PP_5578 | hypothetical protein/hypothetical protein |
TAGCGGTAGTACGTGCTCTTGCCCGAGCAGTCCTGATAGCGTTCGACCTGGGCCAGGGTGTTCCACCACAGGTACTTGGACTTGTAGGTCGCATCGATGATGGTGTGCGGCAGGCCGTCATCGCTGTTCAGGTACTCGGTCATCTGGCCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3516790‑3516639 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAACGCTATCAGGACTGCTCGGGCAAGAGCACGTACTACCGCTATGACGAGCGCCA > NC_002947/3516657‑3516802 TAGCGGTAGTACGTGCTCTTGCCCGAGCAGTCCTGATAGCGTTCGACCTGGGCCAGGGTGTTCCACCACAGGTACTTGGACTTGTAGGTCGCATCGATGATGGTGTGCGGCAGGCCGTCATCGCTGTTCAGGTACTCGGTCATCTGGCCG < 1:661719/150‑1 TTCGACCTGGGCCAGGGTGTTCCACCACAGGTACTTGGACTTGTAGGTCGCATCGATGATGGTGTGCGGCAGGCCGTCATCGCTGTTCAGGTACTCGGCCAGATGACCGAGTAC < 1:865137/114‑1 TTCGACCTGGGCCAGGGTGTTCCACCACAGGTACTTGGACTTGTAGGTCGCATCGATGATGGTGTGCGGCAGGCCGTCATCGCTGTTCAGGTACTCGGCCAGATGACCGAGTAC > 2:865137/1‑114 TAGGTCGCATCGATGATGGTGTGCGGCAGGCCGTCATCGCTGTTCAGGTACTCGGCCAGATGACCGAGTACCTGAACAGCGA < 1:902940/82‑1 TAGGTCGCATCGATGATGGTGTGCGGCAGGCCGTCATCGCTGTTCAGGTACTCGGCCAGATGACCGAGTACCTGAACAGCGA > 2:902940/1‑82 TCGATGATGGTGTGCGGCAGGCCGTCATCGCTGTTCAGGTACTCGGCCAGATGACCGAGTAC < 1:704525/62‑1 TCGATGATGGTGTGCGGCAGGCCGTCATCGCTGTTCAGGTACTCGGCCAGATGACCGAGTAC > 2:704525/1‑62 CTCGGTCATCTGGCCGAGTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAACGCTATCAGGACTGCTCGGGCAAGAGCACGTACTACCGC > 2:409339/1‑150 CGAGTATCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAACGCTATCAGGACTGCTCGGGCAAGAGCACGTACTACCGCTATGACGAGCGCCA > 2:910300/1‑150 TAGCGGTAGTACGTGCTCTTGCCCGAGCAGTCCTGATAGCGTTCGACCTGGGCCAGGGTGTTCCACCACAGGTACTTGGACTTGTAGGTCGCATCGATGATGGTGTGCGGCAGGCCGTCATCGCTGTTCAGGTACTCGGTCATCTGGCCGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3516790‑3516639 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgagTACCTGAACAGCGATGACGGCCTGCCGCACACCATCATCGATGCGACCTACAAGTCCAAGTACCTGTGGTGGAACACCCTGGCCCAGGTCGAACGCTATCAGGACTGCTCGGGCAAGAGCACGTACTACCGCTATGACGAGCGCCA > NC_002947/3516657‑3516802 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |