New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4558064 | 25 (0.580) | 3 (0.070) | 3/244 | NT | 11.1% | coding (136/267 nt) | PP_4045 | hypothetical protein |
? | NC_002947 | = 4558111 | 24 (0.580) | coding (89/267 nt) | PP_4045 | hypothetical protein |
TGACTGGTAGCATCGCCTACCCTAGCAAGCGGCTGTCCTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4557979‑4558064 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccTGTTCTTCGTCAACGGCAGGGCGGCCGCCAGGGTTGGCGACAGGCTCGGCTGTGGGGCGGCGATCACCAGCGGCTCGGCGCTGATGATGGATGAAGGACAGCCGCTTGCTAGGGTAGGCGATGCTACCAGTCATGGCGGCGTCCT < NC_002947/4558111‑4557967 TGACTGGTAGCATCGCCTACCCTAGCAAGCGGCTGTCCTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCTGTTCTTCGTCAACGGCAGGGCGGCCGCCAGGGTTGGCGACAGGCTCGGCTGTGGGGCGGCGAT < 2:168471/150‑1 CTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCTGTTCTTCGTCAACGGCAGGGCGGCCGCCAGGGTTGGCGACAGGCTCGGCTGTGGGG < 1:856261/106‑1 CTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCTGTTCTTCGTCAACGGCAGGGCGGCCGCCAGGGTTGGCGACAGGCTCGGCTGTGGGG > 2:856261/1‑106 CAGCCTGTTCTTCGTCAACGGCAGGGCGGCCGCCAGGGTTGGCGACAGGCTCGGCTGTGGGGCGGCGATCACCAGCGGCTCGGCGCTGATGATGGATGAAGGACAGCCGCTTGCTAGGGTAGGCGATGCTACCAGTCATGGCGGCGTCCT > 1:223043/1‑150 CAGCCTGTTCTTCGTCAACGGCAGGGCGGCCGCCAGGGTTGGCGACAGGCTCGGCTGTGGGGCGGCGATCACCAGCGGCTCGGCGCTGATGATGGATGAAGGACAGCCGCTTGCTAGGGTAGGCGATGCTACCAGTCATGGCGGCGTCCT < 1:443447/150‑1 CAGCCTGTTCTTCGTCAACGGCAGGGCGGCCGCCAGGGTTGGCGACAGGCTCGGCTGTGGGGCGGCGATCACCAGCGGCTCGGCGCTGATGATGGATGAAGGACAGCCGCTTGCTAGGGTAGGCGATGCTACCAGTCATGGCGGCGTCCT > 1:856109/1‑150 TGACTGGTAGCATCGCCTACCCTAGCAAGCGGCTGTCCTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4557979‑4558064 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccTGTTCTTCGTCAACGGCAGGGCGGCCGCCAGGGTTGGCGACAGGCTCGGCTGTGGGGCGGCGATCACCAGCGGCTCGGCGCTGATGATGGATGAAGGACAGCCGCTTGCTAGGGTAGGCGATGCTACCAGTCATGGCGGCGTCCT < NC_002947/4558111‑4557967 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |