New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4558064 | 25 (0.580) | 3 (0.070) | 3/244 | NT | 11.1% | coding (136/267 nt) | PP_4045 | hypothetical protein |
? | NC_002947 | = 4558111 | 24 (0.580) | coding (89/267 nt) | PP_4045 | hypothetical protein |
AGGACGCCGCCATGACTGGTAGCATCGCCTACCCTAGCAAGCGGCTGTCCTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATGGGCAATGGTGAGGGTGACCAAGCAGAACGATGGCAGGCATTGTCGCCACTCCTGAATCATGTAAAGCGCCACGCACTCATGCCGGCAGCGCCAATCAGAATGT > NC_002947/4557967‑4558253 | aGGACGCCGCCATGACTGGTAGCATCGCCTACCCTAGCAAGCGGCTGTCCTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAggctg > 1:223043‑M2/1‑145 (MQ=255) aGGACGCCGCCATGACTGGTAGCATCGCCTACCCTAGCAAGCGGCTGTCCTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAggctg < 1:443447‑M2/150‑6 (MQ=255) aGGACGCCGCCATGACTGGTAGCATCGCCTACCCTAGCAAGCGGCTGTCCTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAggctg > 1:856109‑M2/1‑145 (MQ=255) ccgcctcCATAACTGATAGCATCGCCTACCCTAGCAAGCGGCTGTCCTTCATCCATCATCAGCGCCGACCCGCTGGCGATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTTCCGTGGACGAAGAACAGGCCGGAg < 2:100308/149‑1 (MQ=255) cgccgcCATGACTGGTAGCATCGCCTACCCTAGCAAGCGGCTGTCCTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGc > 2:988801/1‑150 (MQ=255) ccgccATGACTGGTAGAATCGCCTACCCTAGCAAGCGGCTGTCCTTCGTCCATCATCAGCGCCGAGCCGGTGGTGATTGCCGCCCCACAGCCGAGCCTGTAGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCAGGAGCCg > 2:571889/1‑150 (MQ=255) gACTGGTAGCATCGCCTACCCTAGCAAGCGGCTGGCCTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGa < 1:449178/150‑1 (MQ=255) tAGCATCGCCTACCCTAGCAAGCGGCTGTCCTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCtgg < 2:954825/150‑1 (MQ=255) aTCGCCTACCCTAGCAAGCGGCTGTCCTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTggg < 2:486975/150‑1 (MQ=255) cTAGCAAGCGGCTGTCCTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAAt < 1:947980/150‑1 (MQ=255) gCAAGCGGCTGTCCTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACCGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATggg < 1:116322/150‑1 (MQ=255) gCAAGCGGCTGTCCTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATggg < 2:954574/150‑1 (MQ=255) ccTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATGGGCAATGGTGAggg < 1:681225/150‑1 (MQ=255) cTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATGGGCAATGGTGAgg > 1:179924/1‑148 (MQ=255) cTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATGGGCAATGGTGAgg < 2:179924/148‑1 (MQ=255) cTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATGGGCAATGGTGAGGGt > 1:238656/1‑150 (MQ=255) ggtgcccgccgcCCCATCGTTGCGCCTGTCGCCATCCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATGGGCAATGGTGAGGGTGACCAAGCAGAACGATGGCAGGCATTGt < 2:906461/144‑1 (MQ=255) gATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATGGGCAATGGTGAGGGTGACCAAGCAGAACGATGGCAGGCATTGTCGc < 1:663309/150‑1 (MQ=255) aTCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAggctgtggggcggcgatcaccagcggctcggcgctgatgatggatgaaggacagccgcttgctagggtaggcgatgctaccagtca < 2:168471‑M2/150‑87 (MQ=255) ccccACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAggctgtggggcggcgatcaccagcggctcggcgctgatgatggatgaag < 1:856261‑M2/106‑50 (MQ=255) ccccACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAggctgtggggcggcgatcaccagcggctcggcgctgatgatggatgaag > 2:856261‑M2/1‑57 (MQ=255) ccACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATgg < 1:714221/95‑1 (MQ=255) ccACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATgg > 2:714221/1‑95 (MQ=255) cacaGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATGGGCAATGGTGAGGGTGACCAAGCAGAACGATGGCAGGCATTGTCGCCACTCCTGAAt > 2:475262/1‑150 (MQ=255) acaGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATGGGCAATGGTGAGGGTGACCAAGCAGAACGATGGCAGGCATTGTCGCCACTCCTGAATc < 1:475262/150‑1 (MQ=255) tGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATGGGCAATGGTGAGGGTGACCAAGCAGAACGATGGCAGGCATTGTCGCCACTCCTGAATCATGTAAAgcgc > 1:1105081/1‑150 (MQ=255) ccTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCtggtg < 1:386142/58‑1 (MQ=255) ccTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCtggtg > 2:386142/1‑58 (MQ=255) ccTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATGGGCAATGGTGAGGGTGACCAAGCAGAACGATggcag < 2:880159/95‑1 (MQ=255) ccTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATGGGCAATGGTGAGGGTGACCAAGCAGAACGATggcag > 1:880159/1‑95 (MQ=255) aCGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATGGGCAATGGTGAGGGTGACCAATCAGAACGATGGCAGGCATTGTCGCCACTCCTGAATCATGTAAAGCGCCACGCACTCATGCCGGCAGCGCCAATCAGAAt < 1:620517/150‑1 (MQ=255) gaagaaCAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATGGGCAATGGTGAGGGTGACCAAGCAGAACGATGGCAGGCATTGTCGCCACTCCTGAATCATGTAATGCGCCACGCACTCATGCCGGCAGCGCCAATCAGAATGt > 1:57849/1‑150 (MQ=255) | AGGACGCCGCCATGACTGGTAGCATCGCCTACCCTAGCAAGCGGCTGTCCTTCATCCATCATCAGCGCCGAGCCGCTGGTGATCGCCGCCCCACAGCCGAGCCTGTCGCCAACCCTGGCGGCCGCCCTGCCGTTGACGAAGAACAGGCTGGAGCCGCTGCTGACGCTGGTGGGGCCGCACAATGGGCAATGGTGAGGGTGACCAAGCAGAACGATGGCAGGCATTGTCGCCACTCCTGAATCATGTAAAGCGCCACGCACTCATGCCGGCAGCGCCAATCAGAATGT > NC_002947/4557967‑4558253 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |