New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5030148 | 44 (1.020) | 3 (0.070) | 3/244 | NT | 6.9% | coding (739/1353 nt) | PP_4433 | amino acid MFS transporter |
? | NC_002947 | = 5030172 | 39 (0.940) | coding (763/1353 nt) | PP_4433 | amino acid MFS transporter |
TACGAGTGGGGGTGGCGCGTTCCATTCCTGATCGCAGCTCCTCTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5029995‑5030148 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgCCTTTTTGTATTTCCCAAAAATTTCAGCAATAGAAGTCTTCGGTCGAACAGGCTCGCTTGCCATCTTCTTTTCGAGCTCTAGAAACACAGGGGTGTCTTCGATCCTGGTGCGCAAATAGACCGCGATGACGCCCAGAGGAGCTGCGAT < NC_002947/5030172‑5030025 TACGAGTGGGGGTGGCGCGTTCCATTCCTGATCGCAGCTCCTCTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATT > 1:646019/1‑150 CTCCTCTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGCCTTTTTGTATTTCCCAAAAATTTCAGCAATAG < 1:990125/150‑1 CCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGCCTTTTTGTATTTCCCAAAAATTTCAGCAA < 1:1004479/98‑1 CCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTGCCTTTTTGTATTTCCCAAAAATTTCAGCAA > 2:1004479/1‑98 TGCTGCCTTTTTGTATTTCCCAAAAATTTCAGCAATAGAAGTCTTCGGTCGAACAGGCTCGCTTGCCATCTTCTTTTCGAGCTCTAGAAACACAGGGGTGTCTTCGATCCTGGTGCGCAAATAGACCGCGATGACGCCCAGAGGAGCTGC < 2:1020354/150‑1 TGCCTTTTTGTATTTCCCAAAAATTTCAGCAATAGAAGTCTTCGGTCGAACAGGCTCGCTTGCCATCTTCTTTTCGAGCTCTAGAAACACAGGGGTATCATCGGTCCTGGTGCGCAAATAGACCGCGATGACGCCCAGAGGAGCTGCGAT > 1:1092050/1‑150 TACGAGTGGGGGTGGCGCGTTCCATTCCTGATCGCAGCTCCTCTGGGCGTCATCGCGGTCTATTTGCGCACCAGGATCGAAGACACCCCTGTGTTTCTAGAGCTCGAAAAGAAGATGGCAAGCGAGCCTGTTCGACCGAAGACTTCTATTGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5029995‑5030148 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgCCTTTTTGTATTTCCCAAAAATTTCAGCAATAGAAGTCTTCGGTCGAACAGGCTCGCTTGCCATCTTCTTTTCGAGCTCTAGAAACACAGGGGTGTCTTCGATCCTGGTGCGCAAATAGACCGCGATGACGCCCAGAGGAGCTGCGAT < NC_002947/5030172‑5030025 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |