New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5153642	37 (0.850)	4 (0.100)	3/242	NT	10.1%	coding (619/876 nt)	PP_4537	membrane protein
	?	NC_002947	= 5153669	36 (0.870)					coding (592/876 nt)	PP_4537	membrane protein

CCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5153523‑5153642 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcacTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGTGCATGCCTGGTTTCTGGCGGTACGCTGGCGGTGATGAACAACCTGCATGTGCCGGTGG  <  NC_002947/5153669‑5153525                                                                                                                                                                                                                                                                           CCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTG                                                                                                                     >  2:801817/1‑150     ACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGT                                                                                                                 <  1:801817/150‑1                               CGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGT                                                                                                                 <  1:380072/124‑1                               CGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGT                                                                                                                 >  2:380072/1‑124                                                                                                                  caAGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGT                                                            >  2:406560/3‑94                                                                                                                    AGCACTTGCCGAGCACTGACGTGCAATGGGTGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGTGCATGCCTGGTTTCTGGCGGTACGCTGGCGGTGATGAACAACCTGCATGTGCCGGTGG  <  2:140200/150‑1                                                                                                                    AGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGTGCATGCCTGGTTTCTGGCGGTACGCTGGCGGTGATGAACAACCTGCATGTGCCGGTGG  >  1:1121432/1‑150                                                                                                                    AGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGTGCATGCCTGGTTTCTGGCGGTACGCTGGCGGTGATGAACAACCTGCATGTGCCGGTGG  <  1:650919/150‑1                                                                                                                    AGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGTGCATGCCTGGTTTCTGGCGGTACGCTGGCGGTGATGAACAACCTGCATGTGCCGGTGG  <  1:87536/150‑1                                                                                                                    AGCACTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGTGCATGCCTGGTTTCTGGCGGTACGCTGGCGGTGATGAACAACCTGCATGTGCCGGTGG  <  1:909824/150‑1                                                                                                                    AGCACTTGCCGAGCACTGACGTGCAATGGCGGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGTGCATGCCTGGTTTCTGGCGGTACGCTGGCGGTGATGAACAACCTGCATGTGCCGGTGG  <  2:361439/150‑1                                                                                                                                                                                                                                                                           CCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5153523‑5153642 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcacTTGCCGAGCACTGACGTGCAATGGCTGGTGCTGTTGTTCCTGGGGCTGTGTCCGACGGCGCTGGGGCTGTACTGGTGGAACAAAGGTGCATGCCTGGTTTCTGGCGGTACGCTGGCGGTGATGAACAACCTGCATGTGCCGGTGG  <  NC_002947/5153669‑5153525

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.