| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5153642 | 37 (0.850) | 4 (0.100) | 3/242 | NT | 10.1% | coding (619/876 nt) | PP_4537 | membrane protein |
| ? | NC_002947 | = 5153669 | 36 (0.870) | coding (592/876 nt) | PP_4537 | membrane protein | |||||
GTTCCAGATCAACAGGTTCAGCAGCAGCCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGGCGAGCGACCAAGTGACG > NC_002947/5153496‑5153789 | gTTCCAGATCAACAGGTTCAGCAGCAGCCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGTACACAGCCCCAGGAACAACAGCACCAg > 2:987279/1‑150 (MQ=255)gTTCCAGATCAACAGGTTCAGCAGCAGCCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAg > 2:637281/1‑150 (MQ=255)gTTCCAGATCAACAGGTTCAGCAGCAGCCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAg < 1:201268/150‑1 (MQ=255) ccAGATCAACAGGTTCAGCAGCAGCCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCa < 1:632913/150‑1 (MQ=255) aGATCAACAGGTTCAGCAGCAGCCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCAtt > 1:494029/1‑150 (MQ=255) aTCAACAGGTTCAGCAGCAGCCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGc < 2:546936/150‑1 (MQ=255) aGGTTCAGCAGCAGCCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCa < 2:163483/150‑1 (MQ=255) aGGTTCAGCAGCAGCCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCa > 1:85505/1‑150 (MQ=255) agcagcCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCAGTCGGCCACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGc > 1:68327/1‑150 (MQ=255) ccccACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACttgccgagcactgacgtgcaatggctggtg > 2:801817‑M1/1‑120 (MQ=255) ccACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCCGCCATTGCACGTCAGTGCTCGGCAAgtgct < 2:361439‑M2/150‑6 (MQ=255) ccACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAgtgct < 1:87536‑M2/150‑6 (MQ=255) ccACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAgtgct > 1:1121432‑M2/1‑145 (MQ=255) ccACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAgtgct < 1:909824‑M2/150‑6 (MQ=255) ccACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAgtgct < 1:650919‑M2/150‑6 (MQ=255) ccACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCACCCATTGCACGTCAGTGCTCGGCAAgtgct < 2:140200‑M2/150‑6 (MQ=255) aCCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACttgccgagcactgacgtgcaatggctggtgctgt < 1:801817‑M1/150‑35 (MQ=255) gCACATGCAGGTTGTACATCAGCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTAt > 2:501239/1‑150 (MQ=255) acaTGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTg > 2:227245/1‑150 (MQ=255) aaagCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGc < 2:305235/147‑1 (MQ=255) aTGCAGGTTGTTCATCCCCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGcc < 1:55607/150‑1 (MQ=255) aTGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGcc < 1:140200/150‑1 (MQ=255) cAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGaa < 1:361439/150‑1 (MQ=255) cAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAACCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGaa < 1:929446/150‑1 (MQ=255) tcatcaCCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGa > 1:908817/1‑150 (MQ=255) ccGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCg < 1:616609/150‑1 (MQ=255) cGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACttgccgagcactgacgtgcaatggctggtgctgt > 2:380072‑M1/1‑90 (MQ=255) cGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACttgccgagcactgacgtgcaatggctggtgctgt < 1:380072‑M1/124‑35 (MQ=255) gCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGAAATTGCCGAACAGCAGGAAGGCCGgc > 1:501763/1‑150 (MQ=255) ccAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCgttt < 1:214493/150‑4 (MQ=255) gCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAg > 1:145528/1‑150 (MQ=255) gCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAg < 1:227245/150‑1 (MQ=255) tGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTa < 2:85505/150‑1 (MQ=255) aCCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAgtgcttg > 2:406560‑M2/1‑87 (MQ=255) aCCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTgg > 1:406560/1‑94 (MQ=255) ttGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTaa < 2:145528/150‑1 (MQ=255) accaGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGc > 1:671378/1‑150 (MQ=255) accaGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGc > 1:414782/1‑150 (MQ=255) caGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCgg < 2:501763/150‑1 (MQ=255) cccAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAgg > 2:1100222/1‑94 (MQ=255) cccAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAgg < 1:1100222/94‑1 (MQ=255) cccAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCTGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAgtgt < 2:650919/150‑1 (MQ=255) gcCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAgg > 1:384210/1‑150 (MQ=255) acacAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAgtgt > 2:122751/1‑136 (MQ=255) acacAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAgtgt < 1:122751/136‑1 (MQ=255) gCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGgc < 1:987279/150‑1 (MQ=255) ccccAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGgcg > 2:610959/1‑150 (MQ=255) cccNGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGgcga > 2:702605/1‑150 (MQ=255) aacaacAGCACAAGACATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGGCGGGCGAcc > 2:68725/1‑150 (MQ=255) acaacaGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGgcgagc > 2:790815/1‑145 (MQ=255) acaacaGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGgcgagc < 1:790815/145‑1 (MQ=255) caagcACttgccgagcactgacgtgcaatggctggtgctgttgttcctggggctgtgtccgacggcgctggggctgtactggtggaacaaaggt > 2:406560‑M1/3‑7 (MQ=255) acaGCACCAGCCATTGCACGTCAGTGCTCGGCAAgtgctgttgttcctggggctgtgtccgacggcgctggggctgtactggtggaacaaaggtgcatgcctggtttctggcggtacgctggcggtgatgaacaacctgcatgtgccggt < 1:801817‑M2/150‑117 (MQ=255) acaGCACCAGCCATTGCACGTCAGTGCTCGGCAAgtgctgttgttcctggggctgtgtccgacggcgctggggctgtactggtggaacaaaggtgcatgcctggtttctggcggtacgctggcg > 2:380072‑M2/1‑34 (MQ=255) acaGCACCAGCCATTGCACGTCAGTGCTCGGCAAgtgctgttgttcctggggctgtgtccgacggcgctggggctgtactggtggaacaaaggtgcatgcctggtttctggcggtacgctggcg < 1:380072‑M2/124‑91 (MQ=255) aGCACttgccgagcactgacgtgcaatgggtggtgctgttgttcctggggctgtgtccgacggcgctggggctgtactggtggaacaaaggtgcatgcctggtttctggcggtacgctggcggtgatgaacaacctgcatgtgccggtgg < 2:140200‑M1/150‑146 (MQ=255) aGCACttgccgagcactgacgtgcaatggctggtgctgttgttcctggggctgtgtccgacggcgctggggctgtactggtggaacaaaggtgcatgcctggtttctggcggtacgctggcggtgatgaacaacctgcatgtgccggtgg < 1:909824‑M1/150‑146 (MQ=255) aGCACttgccgagcactgacgtgcaatggctggtgctgttgttcctggggctgtgtccgacggcgctggggctgtactggtggaacaaaggtgcatgcctggtttctggcggtacgctggcggtgatgaacaacctgcatgtgccggtgg < 1:87536‑M1/150‑146 (MQ=255) aGCACttgccgagcactgacgtgcaatggctggtgctgttgttcctggggctgtgtccgacggcgctggggctgtactggtggaacaaaggtgcatgcctggtttctggcggtacgctggcggtgatgaacaacctgcatgtgccggtgg < 1:650919‑M1/150‑146 (MQ=255) aGCACttgccgagcactgacgtgcaatggctggtgctgttgttcctggggctgtgtccgacggcgctggggctgtactggtggaacaaaggtgcatgcctggtttctggcggtacgctggcggtgatgaacaacctgcatgtgccggtgg > 1:1121432‑M1/1‑5 (MQ=255) aGCACttgccgagcactgacgtgcaatggcgggtgctgttgttcctggggctgtgtccgacggcgctggggctgtactggtggaacaaaggtgcatgcctggtttctggcggtacgctggcggtgatgaacaacctgcatgtgccggtgg < 2:361439‑M1/150‑146 (MQ=255) cACCAGCCATTGCACGTCAGTGCTCGGCAAgtgctgttgttcctggggctgtgtccgacggcgctggggctgtactggtggaacaaaggtgcatgcctggtttctggcggtacgctggcggtgatgaacaacctgcatgtgccggtgggg > 2:801817‑M2/1‑30 (MQ=255) | GTTCCAGATCAACAGGTTCAGCAGCAGCCCCACCGGCACATGCAGGTTGTTCATCACCGCCAGCGTACCGCCAGAAACCAGGCATGCACCTTTGTTCCACCAGTACAGCCCCAGCGCCGTCGGACACAGCCCCAGGAACAACAGCACCAGCCATTGCACGTCAGTGCTCGGCAAGTGCTGGGTATTGCCGAACAGCAGGAAGGCCGGCAGCACCACCAGCAACGCACCGAGGTAGAAGTAACCGAAGCGGGCGTAGTGTGGCAGGTCGCTGGGGTGGCGAGCGACCAAGTGACG > NC_002947/5153496‑5153789 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |