New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5254003 | 48 (1.110) | 3 (0.070) | 3/242 | NT | 6.0% | coding (679/912 nt) | PP_4630 | MerR family transcriptional regulator |
? | NC_002947 | = 5254030 | 48 (1.160) | coding (652/912 nt) | PP_4630 | MerR family transcriptional regulator |
GGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTTCTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5253849‑5254003 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccgCTGCAGGAGCTTGCGCTGGTCTGCGAACGGCTGAAGCCGGACGCCCTGGTGCTGTTTTCCCATCAGTCGCCCACAGCAGAACTCGCCAGGCACTTCAAGCGCCTGGCGTCGATGCTGGAATGCCCGTTGTTACTGGCTGGTGAAGCAGC < NC_002947/5254030‑5253882 GGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTTCTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTC < 1:913184/150‑1 GCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGAATCCAGGCGCTTGAAGTGCCTGGCGAGTTCTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGCTGCAGGAGCTTGCGCTGGTCTGCGAACGGC < 1:900650/150‑1 TTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTTCTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGCTGCAGGAGCTTGCGCTGGTCTGCGAACGGCTG > 1:706101/1‑150 CCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTTCTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCGCTGCAGGAGCTTGCGCTGGTCTGCGAACGGCTGAAGC < 2:706101/150‑1 GCCGCTGCAGGAGCTTGCGCTGGTCTGCGAACGGCTGAAGCCGGACGCCCTGGTGCTGTTTTCCCATCAGTCGCCCACAGCAGAACTCGCCAGGCACTTCAAGCGCCTGGCGTCGATGCTGGAATGCCCGTTGTTACTGGCTGGTGAAGC < 2:303072/150‑1 GCTGCAGGAGCTTGCGCTGGTCTGCGAACGGCTGAAGCCGGACGCCCTGGTGCTGTTTTCCCATCAGTCGCCCACAGCAGAACTCGCCAGGCACTTCAAGCGCCTGGCGTCGATGCTGGAATGCCCGTTGTTACTGGCTGGTGAAGCAGC < 2:466450/150‑1 GGGCTGCCAGCCAGGCTGTCCTGTACCGCTTCCGCTGCTTCACCAGCCAGTAACAACGGGCATTCCAGCATCGACGCCAGGCGCTTGAAGTGCCTGGCGAGTTCTGCTGTGGGCGACTGATGGGAAAACAGCACCAGGGCGTCCGGCTTCAGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5253849‑5254003 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccgCTGCAGGAGCTTGCGCTGGTCTGCGAACGGCTGAAGCCGGACGCCCTGGTGCTGTTTTCCCATCAGTCGCCCACAGCAGAACTCGCCAGGCACTTCAAGCGCCTGGCGTCGATGCTGGAATGCCCGTTGTTACTGGCTGGTGAAGCAGC < NC_002947/5254030‑5253882 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |