New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5492350 = | 37 (0.850) | 3 (0.070) | 3/236 | NT | 8.8% | intergenic (‑103/+16) | PP_5716/cobJ | hypothetical protein/precorrin‑3B C17‑methyltransferase |
? | NC_002947 | 5492394 = | 28 (0.700) | coding (1670/1698 nt) | cobJ | precorrin‑3B C17‑methyltransferase |
CTTGGCCGAACTGCTGCCAGAAATGGTCGACATGCGCACCATGGTGCTGGTTGGATCGTCCACTACCTGCACTTTCGACCGCGCAGCTGGCGGGGTTTGGGTCTATACCCCGCGCTGGTATGGCGCAAAGCCGTAAGCGGCGGCAGCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5492501‑5492350 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcgggGTATAGACCCAAACCCCGCCAGCTGCGCGGTCGAAAGTGCAGGTAGTGGACGATCCAACCAGCACCATGGTGCGCATGTCGACCATTTCTGGCAGCAGTTCGGCCAAGGTGACTACCTTCAGCGTCTGCCCCGGCCTACCGATGTCACG > NC_002947/5492394‑5492542 CTTGGCCGAACTGCTGCCAGAAATGGTCGACATGCGCACCATGGTGCTGGTTGGATCGTCCACTACCTGCACTTTCGACCGCGCAGCTGGCGGGGGTTGGGTCTATATCCCGCGCTGGTATGGCGCAAAGCCGTAAGCGGCGGCAGCGCG > 1:446310/1‑150 TGGGTCTATACCCCGCGCTGGTATGGCGCAAAGCCGTAAGCGGCGGCAGCGCGGGGTATAGACCCAAACCCCGCCAGCTGCGCGGTCGAAAGTGCAGGTAGTGGACGATCCAACCAGCACCATGGTGCGCATGTCGACCATTTCTGGCAG > 1:1022911/1‑150 ATACCCCGCGCTGGTATGGCGCAAAGCCGTAAGCGGCGGCAGCGCGGGGTATAGACCCAAACCCCGCCAGCTGCGCGGTCGAAAGTGCAGGTAGTGGACGATCCAACCAGCACCATGGTGCGCATGTCGACCATTTCT > 1:858659/1‑138 ATACCCCGCGCTGGTATGGCGCAAAGCCGTAAGCGGCGGCAGCGCGGGGTATAGACCCAAACCCCGCCAGCTGCGCGGTCGAAAGTGCAGGTAGTGGACGATCCAACCAGCACCATGGTGCGCATGTCGACCATTTCT < 2:858659/138‑1 CGGGGTATAGACCCAAACCCTGCCAGCTGCGCGGTCGAAAGTGCAGGTAGTGGACGATCCAACCAGCACCATGGTGCGCATGTCGACAATATTAATGAGCAGTTCGGCCAAGGTGACTACCTTCAGCGTCTGCCCCGGCCTACCGATGTC > 1:562050/1‑150 GGTATAGACCCAAACCCCGCCAGCTGCGCGGTCGAAAGTGCAGGTAGTGGACGATCCAACCAGCACCATGGTGCGCATGTCGACCATTTCTGGCAGCAGTTCGGCCAAGGTGACTACCTTCAGCGTCTGCCCCGGCCTACCGATGTCACG > 2:559082/1‑150 CTTGGCCGAACTGCTGCCAGAAATGGTCGACATGCGCACCATGGTGCTGGTTGGATCGTCCACTACCTGCACTTTCGACCGCGCAGCTGGCGGGGTTTGGGTCTATACCCCGCGCTGGTATGGCGCAAAGCCGTAAGCGGCGGCAGCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5492501‑5492350 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcgggGTATAGACCCAAACCCCGCCAGCTGCGCGGTCGAAAGTGCAGGTAGTGGACGATCCAACCAGCACCATGGTGCGCATGTCGACCATTTCTGGCAGCAGTTCGGCCAAGGTGACTACCTTCAGCGTCTGCCCCGGCCTACCGATGTCACG > NC_002947/5492394‑5492542 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |