New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5496854 =	47 (1.080)	7 (0.170)	6/246	NT	11.7%	intergenic (‑122/‑122)	cobG/cobL	precorrin‑3B synthase/precorrin‑6Y C(5,15)‑methyltransferase
	?	NC_002947	5496938 =	60 (1.430)					intergenic (‑206/‑38)	cobG/cobL	precorrin‑3B synthase/precorrin‑6Y C(5,15)‑methyltransferase

CCGCTTCGCGCCCCTTCGCGGGCAAGCCCGCTCCTACAGGTACAGTGCAGCATGTGCAGCCTGCAGTGATCCTGTGGGAGCGGGCGAGCCCGTGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5496950‑5496854 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGCATCGGCGAAGACGGCTTCAGCGGCCTGGGCAAACAGGCCCGGCGCGCCCTGCTGGGCGCTGGC  >  NC_002947/5496938‑5497065                                                                                                                                                                                                                                   CCGCTTCGCGCCCCTTCGCGGGCAAGCCCGCTCCTACAGGTACAGTGCAGCATGTGCAGCCTGCAGTGATCCTGTGGGAGCGGGCGAGCCCGTGAAGAAG‑GCGACGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGA                                                                            >  2:1084417/1‑150            CCCTTCGCGGGCAAGCCCGCTCCTACAGGTACAGTGCAGCATGTGCAGCCTGCAGTGATCCTGTGGGAGCGGGCGAGCCCGTGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGG                                                                  >  1:159787/1‑150                     GGCAAGCCCGCTCCTACAGGTACAGTGCAGCATGTGCAGCCTGCAGTGATCCTGTGGGAGCGGGCGAGCCCGTGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGCATCGGCGA                                                         >  1:549262/1‑150                            CCGCTCCTACAGGTACAGTGCAGCATGTGCAGCCTGCAGTGATCCTGTGGGAGCGGGCGAGCCCGTGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGCATCGGCGAAGACGGC                                                  <  2:159787/150‑1                                   TACAGGTACAGTGCAGCATGTGCAGCCTGCAGTGATCCTGTGGGAGCGGGCGAGCCCGTGAAGAAG‑GCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGCATCGGCGAAGACGGCTTCAGCGG                                          >  1:465434/1‑150                                                       TGCAGCCTGCAGTGATCCTGTGGGAGCGGGCGAGCCCGTGAAGAAG‑GCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGCATCGGCGAAGACGGCTTCAGCGGCCTGGGCAAACAGGCCCGGC                      <  2:465434/150‑1                                                                            cttcGCGGGCAAGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGCATCGGCGAAGACGGCTTCAGCGGCCTGGGCAAACAGGCCCGGCGCGCCCTGCTGGGCGCTGGC  >  1:421392/5‑150                                                                                                                                                                                                                                   CCGCTTCGCGCCCCTTCGCGGGCAAGCCCGCTCCTACAGGTACAGTGCAGCATGTGCAGCCTGCAGTGATCCTGTGGGAGCGGGCGAGCCCGTGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5496950‑5496854 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGCATCGGCGAAGACGGCTTCAGCGGCCTGGGCAAACAGGCCCGGCGCGCCCTGCTGGGCGCTGGC  >  NC_002947/5496938‑5497065

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.