New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5496854 = | 47 (1.080) | 7 (0.170) | 6/246 | NT | 11.7% | intergenic (‑122/‑122) | cobG/cobL | precorrin‑3B synthase/precorrin‑6Y C(5,15)‑methyltransferase |
? | NC_002947 | 5496938 = | 60 (1.430) | intergenic (‑206/‑38) | cobG/cobL | precorrin‑3B synthase/precorrin‑6Y C(5,15)‑methyltransferase |
GCCTGGGTCAATGGGGTGTCCGGCAATCTGTGAAAGTGCGCTTGAGTGTAGAAGGCGCGGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGC > NC_002947/5496707‑5497002 | gCCTGGGTCAATGGGGTGTCCGGCAATCTGTGAAAGTGCGCTTGAGTGTAGAAGGCGCGGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCcttctt > 1:1019825/1‑150 (MQ=255) ccTGGGTCAATGGGGTGTCCGGCAATCTGTGAAAGTGCGCTTGAGTGTAGAAGGCGCGGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCttcttc > 2:201123/1‑150 (MQ=255) gtgtCCGGCAATCTGTGAAAGTGCGCTTGAGTGTAGAAGGCGCGGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACgg < 2:633639/140‑1 (MQ=255) gtgtCCGGCAATCTGTGAAAGTGCGCTTGAGTGTAGAAGGCGCGGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACgg > 1:633639/1‑140 (MQ=255) gccagcgcccagcagggcgcgccgggcctgtttgcccaggccgctgaagccgtcttcgccgatgcctactactgtcagccagggtgtcatgtatttcaatccgccatttttggggccgcttcgcgcccCTTCGCGGGCTTGcccgcgaag > 1:421392‑M1/129‑146 (MQ=255) ccGGCAATCTGTGAAAGTGCGCTTGAGTGTAGTAGGCGCGGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTccc > 2:627242/1‑150 (MQ=255) cGGCAATCTGTGAAAGTGCGCTTGAGTGTGGAAGGCGCGGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCca < 2:1044442/150‑1 (MQ=255) cGGCAATCTGTGAAAGTGCGCTTGAGTGTAGAAGGCGCGGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCca > 1:1001984/1‑150 (MQ=255) aTCTGTGAAAGTGCGCTTGAGTGTAGAAGGCGCGGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGa > 1:798039/1‑150 (MQ=255) tgAAAGTGCGCTTGAGTGTAGAAGGCGCGGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACt < 1:637351/150‑1 (MQ=255) gccgggcctgtttgcccaggccgctgaagccgtcttcgccgatgcctactactgtcagccagggtgtcatgtatttcaatccgccatttttggggccgcttcgccttCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGca < 2:465434‑M1/43‑1 (MQ=255) ttGAGTGTAGAAGGCGCGGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGcac > 2:753104/1‑150 (MQ=255) tgtAGAAGGCGCGGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACAtgct > 2:407956/1‑150 (MQ=255) aaGGCGCGGTATTATGCCGGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACAGGCTGCACt > 2:376576/1‑150 (MQ=255) gcgGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTAcc > 2:1015778/1‑150 (MQ=255) gcgGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTAcc > 2:720430/1‑150 (MQ=255) gcgGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTAcc > 2:422567/1‑150 (MQ=255) ccgctgaagccgtcttcgccgatgcctactactgtcagccagggtgtcatgtatttcaatccgccatttttggggccgcttcgccttCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTa > 1:465434‑M1/88‑150 (MQ=255) attatGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAg > 1:652618/1‑150 (MQ=255) gccgtcttcgccgatgcctactactgtcagccagggtgtcatgtatttcaatccgccatttttggggccgcttcgcgcccCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCgg < 2:159787‑M1/70‑1 (MQ=255) cTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTCCATCTAGCAGCgtt > 2:79111/1‑148 (MQ=255) cTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCggg > 2:1076216/1‑150 (MQ=255) ttGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGc < 2:1001984/150‑1 (MQ=255) tcgccgatgcctactactgtcagccagggtgtcatgtatttcaatccgccatttttggggccgcttcgcgcccCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGcc > 1:549262‑M1/74‑150 (MQ=255) ggcggcATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGa > 2:665951/1‑150 (MQ=255) ggcggcATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGa > 1:246829/1‑150 (MQ=255) gcggcATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGaa < 1:1015778/150‑1 (MQ=255) cggcATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAg < 1:407956/150‑1 (MQ=255) gcATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAggg > 1:558064/1‑150 (MQ=255) cctactactgtcagccagggtgtcatgtatttcaatccgccatttttggggccgcttcgcgcccCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAggg > 1:159787‑M1/65‑150 (MQ=255) aTGAAAAGCCGGTGGTCGAGCATCCTCGGCGAGCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGgc > 2:625990/1‑150 (MQ=255) gAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGgcgc < 2:652618/150‑1 (MQ=255) gAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGgcgc < 2:246829/150‑1 (MQ=255) aaaaGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGccc > 1:836448/1‑75 (MQ=255) aaaaGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGccc < 2:836448/75‑1 (MQ=255) aaaaGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGcgcg > 1:746504/1‑150 (MQ=255) aaaGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGa > 2:891356/1‑150 (MQ=255) tcagccagggtgtcatgtatttcaatccgccatttttggggccgcgtcgccttCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCgg > 2:1084417‑M1/54‑150 (MQ=255) cGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCgg > 2:167498/1‑150 (MQ=255) cGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCaaa > 1:1020132/1‑150 (MQ=255) gAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCaaaa > 1:343916/1‑150 (MQ=255) tCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGc < 1:201123/150‑1 (MQ=255) tCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGa > 2:689586/1‑150 (MQ=255) tCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGa > 1:73123/1‑150 (MQ=255) tCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGa > 2:499656/1‑150 (MQ=255) gCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCACCAACAATGGCGGAATg > 2:904178/1‑150 (MQ=255) aTCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGaaa < 1:627242/150‑1 (MQ=255) aTCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGaaa < 1:1076216/150‑1 (MQ=255) tCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCt > 2:592419/1‑150 (MQ=255) tCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCt < 1:720430/150‑1 (MQ=255) aGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTgg < 2:73123/150‑1 (MQ=255) ggACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGc < 2:746504/150‑1 (MQ=255) aCCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTg > 1:511062/1‑150 (MQ=255) gcgTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACa < 1:167498/150‑1 (MQ=255) gtagCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCaaaaa < 1:396920/111‑1 (MQ=255) gTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCaaaaa > 2:396920/1‑114 (MQ=255) tCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGATGTTCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACagta < 1:79111/150‑1 (MQ=255) gCCTTCTTCACGGGCTCGCCCGCTCCGACAGGATCTTGGCAGGCTGCACATGCTGCACTGTACCTGTAGGGGAGGGCTTGCCGGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACaggagt > 1:933341/1‑150 (MQ=255) ccTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAgtagta < 1:592419/150‑1 (MQ=255) cttcttCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAACAATGGCGGATTGAAATACATGACACCCTGGCTGACAGtagtag < 1:753104/150‑1 (MQ=255) tcttcACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGc > 1:236880/1‑150 (MQ=255) | GCCTGGGTCAATGGGGTGTCCGGCAATCTGTGAAAGTGCGCTTGAGTGTAGAAGGCGCGGTATTATGCCTGCTTTGTCCGGCGGCATGAAAAGCCGGTGGTCGAGCATCCTCGGCGATCAAGTAGAAATTCAGGACCGCGTCGCCTTCTTCACGGGCTCGCCCGCTCCCACAGGATCACTGCAGGCTGCACATGCTGCACTGTACCTGTAGGAGCGGGCTTGCCCGCGAAGGGGCGCGAAGCGGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGC > NC_002947/5496707‑5497002 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |