New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2158382 =	36 (0.830)	6 (0.140)	6/244	NT	14.2%	coding (689/741 nt)	fabG	3‑oxoacyl‑ACP reductase subunit
	?	NC_002947	2158422 =	38 (0.910)					coding (729/741 nt)	fabG	3‑oxoacyl‑ACP reductase subunit

TCGGTGACCCCAGGCTTCATCGATACCGACATGACCCGCGAGCTGCCAGAAGCTCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAG  >  NC_002947/2158234‑2158524                                                                                                                                                     |                                                                                                                                               tCGGTGACCCCAGGCTTCATCGATACCGACATGACCCGCGAGCTGCCAGAAGCTCAGCGCGAAGCCCTGCAGCCCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGcgcc                                                                                                                                               <  2:821683/150‑1 (MQ=255)    ttGACCCCAGGCTTCATCGATACCGACATGACCCGCGAGCTGCCAGAAGCTCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCgccgcc                                                                                                                                            >  2:187335/2‑150 (MQ=255)    cttttcaagcaaaacgcaccttcaggctagtcaccacacccgctgcctggaatctggttgcagctttataacggattttaggctcgcagtatgactctttttttacgaaacccgtcacattgagttgcagtattacatgtacatcCCGcc                                                                                                                                            >  1:946414‑M1/146‑150 (MQ=255)      gACCCCAGGCTTCATCGATACCGACATGACCCGCGAGCTGCCAGAAGCTCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTa                                                                                                                                          <  2:121357/150‑1 (MQ=255)        ccccAGGCTTCATCGAAAACGACATGACCCGCGAGCTGCCAGAAGCTCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACg                                                                                                                                        >  2:325577/1‑150 (MQ=255)         cccAGGCTTCATCGATACCGACATGACCCGCGAGCTGCCAGAAGCTCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGt                                                                                                                                       >  2:310993/1‑150 (MQ=255)              gCTTCATCGATACCGACATGACCCGCGAGCTGCCAGAAGCTCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCg                                                                                                                                  <  2:747715/150‑1 (MQ=255)                                      gcgAGCTGCCAGAAGCTCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAAcggcg                                                                                                          <  1:187335/150‑1 (MQ=255)                                       cgAGCCGCCAGAAGCTCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGTCGCTACCGTGCCGGTCAAcggcgg                                                                                                         <  1:704323/150‑1 (MQ=255)                                       acacccgctgcctggaatctggttgcagctttataacggattttaggctcgcagtatgactctttttttacgaaacccgtcacattgagttgcagtattacatgtacatcCCGCCGT‑‑TGACCGGCGCTACCGTGCCGGTCAACGGCGGGa                                                                                                       >  1:282450‑M1/111‑150 (MQ=255)                                             gctgcctggaatctggttgcagctttataacggattttaggctcgcagtatgactctttttttacgaaacccgtcacattgagttgcagtattacatgtacatcCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTa                                                                                                   >  2:170566‑M1/105‑150 (MQ=255)                                              ccAGAAGCTCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTAc                                                                                                  <  1:325577/150‑1 (MQ=255)                                               cAGAAGCTCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAAATGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTCCCGGTCAACGGCGGGATGTACa                                                                                                 >  2:385158/1‑150 (MQ=255)                                                    gCTCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTaa                                                                                            >  2:732582/1‑150 (MQ=255)                                                      tCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATa                                                                                          >  2:396508/1‑150 (MQ=255)                                                           gcgAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCa                                                                                     <  1:156555/150‑1 (MQ=255)                                                                 cccTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGTCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCaa                                                                               >  2:933783/1‑150 (MQ=255)                                                                           cggattttaggctcgcagtatgactctttttttacgaaacccgtcacattgagttgcagtattacatgtacatcCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTAc                                                                                                  >  1:205040‑M1/75‑121 (MQ=255)                                                                           cggattttaggctcgcagtatgactctttttttacgaaacccgtcacattgagttgcagtattacatgtacatcCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTAc                                                                                                  <  2:205040‑M1/47‑1 (MQ=255)                                                                               aTTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCg                                                                 <  1:396508/150‑1 (MQ=255)                                                                                    gCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCCGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTaaaa                                                            >  2:682383/1‑150 (MQ=255)                                                                                          ccgccTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAagag                                                      >  2:246010/1‑150 (MQ=255)                                                                                                   tctttttttacgaaacccgtcacattgagttgcagtattacatgtacatcCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGAt                                                                                                      <  1:202681‑M1/43‑1 (MQ=255)                                                                                                   tctttttttacgaaacccgtcacattgagttgcagtattacatgtacatcCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGAt                                                                                                      >  2:202681‑M1/51‑93 (MQ=255)                                                                                                   ccAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGcc                                                                                                                     <  1:397250/78‑1 (MQ=255)                                                                                                   ccAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGcc                                                                                                                     >  2:397250/1‑78 (MQ=255)                                                                                                           aCGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAAt                                                                              >  1:1054735/1‑109 (MQ=255)                                                                                                           aCGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAAt                                                                              <  2:1054816/109‑1 (MQ=255)                                                                                                           aCGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAAt                                                                              <  2:1054735/109‑1 (MQ=255)                                                                                                           aCGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAAt                                                                              >  1:1054816/1‑109 (MQ=255)                                                                                                            cGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTaaa                                    >  1:446268/1‑150 (MQ=255)                                                                                                                    ccAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGt                                                                                                                  <  2:159571/64‑1 (MQ=255)                                                                                                                    ccAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGt                                                                                                                  >  1:159571/1‑64 (MQ=255)                                                                                                                     cAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTtat                           >  1:717772/1‑150 (MQ=255)                                                                                                                      aaGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTtata                          >  2:136343/1‑150 (MQ=255)                                                                                                                         gtggtTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAg                       <  2:588997/150‑1 (MQ=255)                                                                                                                          tggtTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGc                      <  1:933783/150‑1 (MQ=255)                                                                                                                             tttCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTaaaaa                                                           >  2:219790/1‑110 (MQ=255)                                                                                                                             tttCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTaaaaa                                                           <  1:219790/110‑1 (MQ=255)                                                                                                                             tttCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGc                   >  1:145116/1‑150 (MQ=255)                                                                                                                                  ttCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAAcaa              >  2:233399/1‑148 (MQ=255)                                                                                                                                    ccTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAgc            >  2:430792/1‑149 (MQ=255)                                                                                                                                       ggCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCACGAAAATGTCGGTTGTGATTTACATGTAATACTTCTACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTc         >  1:1041379/1‑150 (MQ=255)                                                                                                                                        gCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTcc        <  2:717772/150‑1 (MQ=255)                                                                                                                                              gACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAg  >  2:415945/1‑150 (MQ=255)                                                                                                                                                  gcgcCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGt                              >  1:139281/1‑118 (MQ=255)                                                                                                                                                  gcgcCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGt                              <  2:139281/118‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                               TCGGTGACCCCAGGCTTCATCGATACCGACATGACCCGCGAGCTGCCAGAAGCTCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAG  >  NC_002947/2158234‑2158524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.