New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2158382 =	36 (0.830)	6 (0.140)	6/244	NT	14.2%	coding (689/741 nt)	fabG	3‑oxoacyl‑ACP reductase subunit
	?	NC_002947	2158422 =	38 (0.910)					coding (729/741 nt)	fabG	3‑oxoacyl‑ACP reductase subunit

CGAGCTGCCAGAAGCTCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGACTAGCCTGAAGGTGCGTTTTGCTTGAAAAG  >  NC_002947/2158272‑2158566                                                                                                                                                       |                                                                                                                                                 acacccgctgcctggaatctggttgcagctttataacggattttaggctcgcagtatgactctttttttacgaaacccgtcacattgagttgcagtattacatgtacatcCCGCCGT‑‑TGACCGGCGCTACCGTGCCGGTCAACGGCGGGa                                                                                                                                                 >  1:282450‑M1/111‑150 (MQ=255)       gctgcctggaatctggttgcagctttataacggattttaggctcgcagtatgactctttttttacgaaacccgtcacattgagttgcagtattacatgtacatcCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTa                                                                                                                                             >  2:170566‑M1/105‑150 (MQ=255)        ccAGAAGCTCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTAc                                                                                                                                            <  1:325577/150‑1 (MQ=255)         cAGAAGCTCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAAATGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTCCCGGTCAACGGCGGGATGTACa                                                                                                                                           >  2:385158/1‑150 (MQ=255)              gCTCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTaa                                                                                                                                      >  2:732582/1‑150 (MQ=255)                tCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATa                                                                                                                                    >  2:396508/1‑150 (MQ=255)                     gcgAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCa                                                                                                                               <  1:156555/150‑1 (MQ=255)                           cccTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGTCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCaa                                                                                                                         >  2:933783/1‑150 (MQ=255)                                     cggattttaggctcgcagtatgactctttttttacgaaacccgtcacattgagttgcagtattacatgtacatcCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTAc                                                                                                                                            <  2:205040‑M1/47‑1 (MQ=255)                                     cggattttaggctcgcagtatgactctttttttacgaaacccgtcacattgagttgcagtattacatgtacatcCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTAc                                                                                                                                            >  1:205040‑M1/75‑121 (MQ=255)                                         aTTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCg                                                                                                           <  1:396508/150‑1 (MQ=255)                                              gCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCCGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTaaaa                                                                                                      >  2:682383/1‑150 (MQ=255)                                                    ccgccTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAagag                                                                                                >  2:246010/1‑150 (MQ=255)                                                             tctttttttacgaaacccgtcacattgagttgcagtattacatgtacatcCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGAt                                                                                                                                                <  1:202681‑M1/43‑1 (MQ=255)                                                             tctttttttacgaaacccgtcacattgagttgcagtattacatgtacatcCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGAt                                                                                                                                                >  2:202681‑M1/51‑93 (MQ=255)                                                                     aCGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAAt                                                                                                                        <  2:1054816/109‑1 (MQ=255)                                                                     aCGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAAt                                                                                                                        <  2:1054735/109‑1 (MQ=255)                                                                     aCGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAAt                                                                                                                        >  1:1054735/1‑109 (MQ=255)                                                                     aCGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAAt                                                                                                                        >  1:1054816/1‑109 (MQ=255)                                                                      cGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTaaa                                                                              >  1:446268/1‑150 (MQ=255)                                                                               cAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTtat                                                                     >  1:717772/1‑150 (MQ=255)                                                                                aaGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTtata                                                                    >  2:136343/1‑150 (MQ=255)                                                                                   gtggtTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAg                                                                 <  2:588997/150‑1 (MQ=255)                                                                                    tggtTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGc                                                                <  1:933783/150‑1 (MQ=255)                                                                                       tttCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTaaaaa                                                                                                     >  2:219790/1‑110 (MQ=255)                                                                                       tttCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTaaaaa                                                                                                     <  1:219790/110‑1 (MQ=255)                                                                                       tttCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGc                                                             >  1:145116/1‑150 (MQ=255)                                                                                            ttCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAAcaa                                                        >  2:233399/1‑148 (MQ=255)                                                                                              ccTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAgc                                                      >  2:430792/1‑149 (MQ=255)                                                                                                 ggCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCACGAAAATGTCGGTTGTGATTTACATGTAATACTTCTACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTc                                                   >  1:1041379/1‑150 (MQ=255)                                                                                                  gCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTcc                                                  <  2:717772/150‑1 (MQ=255)                                                                                                        gtacatcccgccgttgaccggcacggtagcgccggtcacgtaggcggGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCg                                                                         >  1:205040‑M2/48‑121 (MQ=255)                                                                                                        gtacatcccgccgttgaccggcacggtagcgccggtcacgtaggcggGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCg                                                                         <  2:205040‑M2/74‑1 (MQ=255)                                                                                                        gACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAg                                            >  2:415945/1‑150 (MQ=255)                                                                                                         tacatcccgccgttgaccggcacggtagcgccggtcacgtaggcggGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGc                                           >  2:170566‑M2/47‑150 (MQ=255)                                                                                                            gcgcCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGt                                                                        <  2:139281/118‑1 (MQ=255)                                                                                                            gcgcCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGt                                                                        >  1:139281/1‑118 (MQ=255)                                                                                                            atcccgccgttgaccggcacggtagcgccggtcacgtaggcggGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAaga                                                                                                 <  1:202681‑M2/50‑1 (MQ=255)                                                                                                            atcccgccgttgaccggcacggtagcgccggtcacgtaggcggGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAaga                                                                                                 >  2:202681‑M2/44‑93 (MQ=255)                                                                                                               tcccgccgttgaccggcacggtagcgccggtcaacggcggGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGgtgt                                     >  1:282450‑M2/41‑150 (MQ=255)                                                                                                                  CCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTgtggt                                  >  1:415945‑M1/1‑150 (MQ=255)                                                                                                                  CCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTgtggt                                  >  1:1098824‑M1/1‑150 (MQ=255)                                                                                                                     aCGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGAc                               <  2:767676/150‑1 (MQ=255)                                                                                                                         gACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGACTAGc                           <  2:446268/150‑1 (MQ=255)                                                                                                                                gcTACCGTGACGGTCAACGGCGGGATGTACATGTAATACTGCAACACAATGTGACGAGTTTCGGAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGACTAGCCTGAAgg                    <  2:498685/150‑1 (MQ=255)                                                                                                                                     cGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGACTAGCCTGAAGGTGCGt               <  1:385158/150‑1 (MQ=255)                                                                                                                                     cGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGT‑AAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGACTAGCCTGAAGGTGCGtt              <  1:310993/150‑1 (MQ=255)                                                                                                                                       tGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGACTAGCCTGAAGGTGCGttt             >  2:112856/1‑150 (MQ=255)                                                                                                                                           ggTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGACTAGCCTGAAGGTGTGTTTTGCt         <  2:282450/150‑1 (MQ=255)                                                                                                                                            gTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATACAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGACTAGCCTGAAGGTGCGTTTTGCtt        <  1:136343/150‑1 (MQ=255)                                                                                                                                            gTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGACTAGCCTGAAGGTGCGTTTTGCtt        <  1:246010/150‑1 (MQ=255)                                                                                                                                            gTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGCCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGACTAGCCTGAAGGTGCGTTTTGCtt        >  1:189375/1‑150 (MQ=255)                                                                                                                                                  ggcggGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGACTAGCCTGAAGGTGCGTTTTGCTTGAAAAg  >  1:946414‑M2/6‑150 (MQ=255)                                                                                                                                                       |                                                                                                                                                 CGAGCTGCCAGAAGCTCAGCGCGAAGCCCTGCAGACCCAGATTCCGCTGGGCCGCCTGGGCCAGGCTGACGAAATTGCCAAGGTGGTTTCGTTCCTGGCATCCGACGGCGCCGCCTACGTGACCGGCGCTACCGTGCCGGTCAACGGCGGGATGTACATGTAATACTGCAACTCAATGTGACGGGTTTCGTAAAAAAAGAGTCATACTGCGAGCCTAAAATCCGTTATAAAGCTGCAACCAGATTCCAGGCAGCGGGTGTGGTGACTAGCCTGAAGGTGCGTTTTGCTTGAAAAG  >  NC_002947/2158272‑2158566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.