New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2645464 | 27 (0.620) | 3 (0.070) | 3/236 | NT | 10.2% | coding (1893/2499 nt) | PP_2316 | ABC transporter permease |
? | NC_002947 | = 2645496 | 28 (0.700) | coding (1861/2499 nt) | PP_2316 | ABC transporter permease |
ACAGCGCGACGACATCCAGGTCATGCCCCGGTGCCAGGTAGAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCATCTGCAGTTTCAGGCTGCTGGCCAGTTCCGCCTCCACCGAAACCCCGGGGATATCGTTGTCGGCTGGCAAGGCTGGCCACCAACTGCCTGCGGTCAGC > NC_002947/2645316‑2645611 | aCAGCGCGACGACATCCAGGTCATGCCCCGGTGCCAGGTAGAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGCACATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGAcgc > 1:290873/1‑150 (MQ=255) gcgcGACGACATCCAGGTCATGCCCCGGTGCCAGGTAGAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCggg > 2:45747/1‑150 (MQ=255) cgacgaCATCCAGGTCATGCCCCGGTGCCAGGTAGAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCt < 1:83729/150‑1 (MQ=255) acgacATCCAGGTCATGCCCCGGTGCCAGGTAGAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTgg < 1:940377/150‑1 (MQ=255) aTCCAGGTCATGCCCCGGTGCCAGGTAGAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCgctg > 1:1038314/1‑150 (MQ=255) cAGGTCATGCCCCGGTGCCAGGTAGAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGctgctg < 2:1038314/150‑1 (MQ=255) aGGTCATGCCCCGGTGCCAGGTAGAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTgg > 1:272159/1‑150 (MQ=255) gTCATGCCCCGGTGCCAGGTAGAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGgcc < 2:946217/150‑1 (MQ=255) cccGGTGCCAGGTAGAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAata > 1:598592/1‑150 (MQ=255) cAGGTAGAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGATGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAAcgt > 1:293700‑M2/1‑147 (MQ=255) cAGGTAGAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAAcgt < 2:402495‑M2/150‑4 (MQ=255) aGGTAGAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGttcgatattggcggccagcagcgccaggcccgcgtc > 2:80136‑M1/1‑114 (MQ=255) gAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGttcgatattggcggccagcagcgccaggcccgcgtcagcag < 1:80136‑M1/150‑42 (MQ=255) aaGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGttcgatattggcggccagcagcgccaggcccgcgtcagcagc < 1:157333‑M1/150‑43 (MQ=255) aGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGt < 1:402495/150‑1 (MQ=255) cAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCAt < 2:598592/150‑1 (MQ=255) ggTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCATCt < 1:998230/150‑1 (MQ=255) cGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCATCTGCAGTTTCAg < 1:279133/150‑1 (MQ=255) ggCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCATCTGCAGTTTCAgg < 1:1033678/150‑1 (MQ=255) ggCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCCCCCATCTGCAGTTTCAgg > 2:264083/1‑150 (MQ=255) tGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCATCTGCAGTTTCAGGCTGCTGGcc > 1:476656/1‑150 (MQ=255) gCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGc > 2:953006/1‑79 (MQ=255) gCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGc < 1:953006/79‑1 (MQ=255) gCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGCCAGCAGGTCGCCCATCTGCAGTTTCAGGCTGCTGGCCAGtt > 2:463525/1‑150 (MQ=255) gCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCATCTGCAGTTTCAGGCTGCTGACCCGttacac < 2:884476/150‑5 (MQ=255) gAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCATCTGCAGTTTCAGGCTGCTGGCCAGTTCCGCCTCCCCCGa > 2:255287/1‑150 (MQ=255) gTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCATCTGCAGTTTCAGGCTGCTGGCCAGTTCCGCCTCCACCGAAACCCCggg < 1:600392/150‑1 (MQ=255) aaGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCATCTGCAGTTTCAGGCTGCTGGCCAGTTCCGCCTCCACCGAAACCCCgggg > 1:1007364/2‑150 (MQ=255) gAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGGTCCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCATCTGCAGTTTCAGGCTGCTGGCCAGTTCCGCCTCCACCGAAACCCCGGGGATATCGTTGTCGGc < 1:67366/150‑1 (MQ=255) aaGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCATCTGCAGTTTCAGGCTGCTGGCCAGTTCCGCCTCCACCGAAACCCCGGGGATATCGTTGTCGGCt < 1:45747/150‑1 (MQ=255) tGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCATCTGCAGTTTCAGGCTGCTGGCCAGTTCCGCCTCCACCGAAACCACGGGGATATCGTTGTCGGCTGGCa < 2:272159/150‑1 (MQ=255) ccAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCAAACGTCAGCAGGTCGCCCATCTGCAGTTTCAGGCTGCTGGCCAGTTCCGCCTCCACCGAAACCCCGGGGATATCGTTGTCGGCTGGCAAGGc > 1:691272/1‑150 (MQ=255) aCGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCATCTGCAGTTTCAGGCTGCTGGCCAGTTCCGCCTCCACCGAAACCCCGGGGATATCGTTGTCGGCTGGCAAGGCTGGccac < 2:476656/150‑1 (MQ=255) aCGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCATCTGCAGTTTCAGGCTGCTGGCCAGTTCCGCCTCCACCGAAACCCCGGGGATATCGTTGTCGGCTGGCAAGGCTGGccac > 1:339464/1‑150 (MQ=255) gcAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCATCTGCAGtt < 1:1017920/72‑1 (MQ=255) gcAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCATCTGCAGtt > 2:1017920/1‑72 (MQ=255) gctgctGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAAcgtcagcagcctgcgcaacgtgcattgggacagcttccagccgaacttctacatgatcttccagcctggcacgctgcaggggctgccgaccacttacctgaccagctt < 1:157333‑M2/150‑109 (MQ=255) ctgctgACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAAcgtcagcagcctgcgcaacgtgcattgggacagcttccagccgaacttctacatgatcttccagcctggcacgctgcaggggctgccgaccacttacctgaccagcttc < 1:80136‑M2/150‑110 (MQ=255) tgACGCGGGCCGGGCGCTGCTGGCCGCCCCTATCGGACGTCTGCAGGTCGCCCGGCTGCAGTTTCTTGCTCCTGCACAGTTGCGCCTCCGCCGAAACCCCGGGGATATCGTTGTCGGCTGGCAAGGCTGGCCACCAACTGCCTGCGGTCa < 1:255287/150‑1 (MQ=255) gACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAAcgtcagcagcctgcgcaacgtgcattgggacagcttccagccgaacttctacatgatcttccagcctggcacgctgcaggggctgccgaccacttacctgaccagcttctacct > 2:80136‑M2/1‑36 (MQ=255) aCGttcgatattggcggccagcagcgccaggcccgcgtcagcagcctgcgcaacgtgcattgggacagcttccagccgaacttctacatgatcttccagcctggcacgctgcaggggctgccgaccacttacctgaccagcttctacctg < 2:402495‑M1/150‑148 (MQ=255) aCGttcgatattggcggccagcagcgccaggcccgcatcagcagcctgcgcaacgtgcattgggacagcttccagccgaacttctacatgatcttccagcctggcacgctgcaggggctgccgaccacttacctgaccagcttctacctg > 1:293700‑M1/1‑3 (MQ=255) | ACAGCGCGACGACATCCAGGTCATGCCCCGGTGCCAGGTAGAAGCTGGTCAGGTAAGTGGTCGGCAGCCCCTGCAGCGTGCCAGGCTGGAAGATCATGTAGAAGTTCGGCTGGAAGCTGTCCCAATGCACGTTGCGCAGGCTGCTGACGCGGGCCTGGCGCTGCTGGCCGCCAATATCGAACGTCAGCAGGTCGCCCATCTGCAGTTTCAGGCTGCTGGCCAGTTCCGCCTCCACCGAAACCCCGGGGATATCGTTGTCGGCTGGCAAGGCTGGCCACCAACTGCCTGCGGTCAGC > NC_002947/2645316‑2645611 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |