New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5706735 =	44 (1.020)	3 (0.070)	3/244	NT	6.4%	coding (697/4761 nt)	PP_5009	hypothetical protein
	?	NC_002947	5706777 =	45 (1.080)					coding (739/4761 nt)	PP_5009	hypothetical protein

GCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTCCTGGGCGCACAGACCGGTGATCGGACAG  >  NC_002947/5706597‑5706884                                                                                                                                           |                                                                                                                                                      gCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTg                                                                                                                                            >  2:761670/1‑150 (MQ=255)   aaaaGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGt                                                                                                                                          >  2:866549/1‑150 (MQ=255)   aaaaGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGt                                                                                                                                          >  1:77312/1‑150 (MQ=255)       gCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCtg                                                                                                                                      <  1:1087672/150‑1 (MQ=255)       gCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCtg                                                                                                                                      <  1:216084/150‑1 (MQ=255)            aaTGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCtgcaatg                                                                                                                                 >  1:159136/1‑150 (MQ=255)                      cTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGc                                                                                                                       <  1:761670/150‑1 (MQ=255)                           cGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGcggttc                                                                                                                  <  1:455221/150‑1 (MQ=255)                             ggctgtccgatcaccggtctgtgcgcccaggacaacgcctcgaagcgatagcgttgcgctagctgccgttgcagcgcagtggcaaagctgggcaggtcgacatggcgacgAACCGCAACCTGGTTCTGCAATGCAAGCCCTGcggttcgg                                                                                                                >  2:437873‑M1/111‑150 (MQ=255)                                  gTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTtcgt                                                                                                           >  2:48911/1‑150 (MQ=255)                                  gTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTtcgt                                                                                                           >  1:593667/1‑150 (MQ=255)                                      atcaccggtctgtgcgcccaggacaacgcctcgaagcgatagcgttgcgctagctgccgttgcagcgcagtggcaaagctgggcaggtcgacatggcgacgAACCGCAACCTGGTTCTGCAATGCAAGCCCTGcggttc                                                                                                                  >  1:666093‑M1/102‑139 (MQ=255)                                      atcaccggtctgtgcgcccaggacaacgcctcgaagcgatagcgttgcgctagctgccgttgcagcgcagtggcaaagctgggcaggtcgacatggcgacgAACCGCAACCTGGTTCTGCAATGCAAGCCCTGcggttc                                                                                                                  <  2:666093‑M1/38‑1 (MQ=255)                                           aGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCAACAATTCAAGCCCTGCGGTTCGGTTCGTCGCCATGTc                                                                                                  <  1:366807/150‑1 (MQ=255)                                                                  aGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTgc                                                                           <  2:593667/150‑1 (MQ=255)                                                                          tCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCGTCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGcc                                                                                                                           >  2:615551/1‑94 (MQ=255)                                                                          tCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGcc                                                                                                                           <  1:615551/94‑1 (MQ=255)                                                                          tCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAAc                                                                   <  2:287095/150‑1 (MQ=255)                                                                             gAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGc                                                                >  2:248439/1‑150 (MQ=255)                                                                                  gATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGa                                                                                                >  1:709561/1‑113 (MQ=255)                                                                                  gATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGa                                                                                                <  2:709561/113‑1 (MQ=255)                                                                                            cacacaCCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCCAACGATTCTGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCt                                                 >  2:317481/1‑150 (MQ=255)                                                                                             acacacCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTa                                                >  2:359308/1‑150 (MQ=255)                                                                                                   cGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCtt                                          <  2:655872/150‑1 (MQ=255)                                                                                                     ttACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGc                                                             <  1:317114/129‑1 (MQ=255)                                                                                                     ttACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGc                                                             >  2:317114/1‑129 (MQ=255)                                                                                                       aCCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAg                                      <  2:854054/150‑1 (MQ=255)                                                                                                         ccTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCttt                                                                                   >  2:112302/1‑103 (MQ=255)                                                                                                         ccTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCttt                                                                                   <  1:112302/103‑1 (MQ=255)                                                                                                         ccTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGc                                    >  2:339077/1‑150 (MQ=255)                                                                                                         ccTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGc                                    <  2:77312/150‑1 (MQ=255)                                                                                                           tACCGGATCTATTGCTCATCACCACAAGTAGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGGGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGt                                  >  2:306946/1‑150 (MQ=255)                                                                                                            aCCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGtt                                 <  1:48911/150‑1 (MQ=255)                                                                                                                gATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTcc                             >  1:843123/1‑150 (MQ=255)                                                                                                                 aTCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTCCt                            <  1:1088009/150‑1 (MQ=255)                                                                                                                     aTTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTCCTGGgc                        >  2:212005/1‑150 (MQ=255)                                                                                                                      ttGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTCCTGGgcg                       >  2:231481/1‑150 (MQ=255)                                                                                                                         cTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTCCTGGGCGcac                    >  1:343371/1‑150 (MQ=255)                                                                                                                         cTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTCCTGGGCGcac                    >  1:305173/1‑150 (MQ=255)                                                                                                                          tcatcaCCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCa                                                                                        <  2:592946/81‑1 (MQ=255)                                                                                                                          tcatcaCCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCa                                                                                        >  1:592946/1‑81 (MQ=255)                                                                                                                          tcatcaCCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTCCTGGGCGcaca                   >  1:609739/1‑150 (MQ=255)                                                                                                                            atcaCCACAAGCGGCCACCGCAACCTGGTTCTTCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTCCTGGGCGCACAGa                 >  2:406428/1‑150 (MQ=255)                                                                                                                             tcaCCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTCCTGGGCGCACAGAc                <  1:231481/150‑1 (MQ=255)                                                                                                                              caccacAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGt                                  >  2:1119027/1‑131 (MQ=255)                                                                                                                              caccacAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGt                                  <  1:1119027/131‑1 (MQ=255)                                                                                                                               accacAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCACAACTTTGCCACTGAGATGCACCAAACGCTTTTTAGATGCTAGCGCTGCGAGGCGTTGTCCTGGGCGCCCAGACCg              >  1:519577/1‑150 (MQ=255)                                                                                                                                      gTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAgg                                     <  1:819770/120‑1 (MQ=255)                                                                                                                                      gTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAgg                                     >  2:819770/1‑120 (MQ=255)                                                                                                                                          caaccgcaaccTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTCCTGGGCGCACAGACCGGTGATCGGACa   <  1:211796/150‑1 (MQ=255)                                                                                                                                           AACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTCCTGGGCGCACAGACCGGTGATCGGACAg  <  2:388760‑M1/150‑1 (MQ=255)                                                                                                                                           |                                                                                                                                                      GCAAAAGCTGCAATGTACGCCCTGCTCGACGGGGTACACGACAGCCTGGCTGTCGAGGCGATACAAGTCACGCTCGGAACGGATGGCGGGGCACACACCGTTACCCTACCGGATCTATTGCTCATCACCACAAGTGGCAACCGCAACCTGGTTCTGCAATGCAAGCCCTGCGGTTCGGTTCGTCGCCATGTCGACCTGCCCAGCTTTGCCACTGCGCTGCAACGGCAGCTAGCGCAACGCTATCGCTTCGAGGCGTTGTCCTGGGCGCACAGACCGGTGATCGGACAG  >  NC_002947/5706597‑5706884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.