New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5756714 =	58 (1.340)	4 (0.100)	4/236	NT	6.8%	intergenic (+335/‑353)	glnG/PP_5050	two‑component system DNA‑binding response regulator GlnL/GlnG/transposase
	?	NC_002947	5756788 =	56 (1.390)					intergenic (+409/‑279)	glnG/PP_5050	two‑component system DNA‑binding response regulator GlnL/GlnG/transposase

GCTGCCGCCACCGTATTCGCGGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGG  >  NC_002947/5756566‑5756852                                                                                                                                                     |                                                                                                                                           ctacggtctgtactgcgcgaacagtcagaagcgaggtatggccctcctcctcccttcaagtcctaccatacaagcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctctt                                                                                                                                           <  2:999965‑M1/2‑1 (MQ=255)     ccgccACCGTATTCGCGGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTcgcg                                                                                                                                       >  2:485310‑M2/6‑150 (MQ=255)         cACCGTATTCGCGGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTa                                                                                                                                   >  1:127459‑M2/2‑150 (MQ=255)          aCCGTATTCGCGGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTaa                                                                                                                                  >  1:816295/1‑150 (MQ=255)           ccGTATACGCGGGTAAACCCGCGCCTACCCCAGCGCTGGGCACATCTCGGGGTCGCCGCAGGCGCTGGTTAACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTTCCGCTCAGCGTTGCCTCCGCCAGCGTATTCGCGGATaaa                                                                                                                                 >  2:443516/1‑150 (MQ=14)                   gcgGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCGGCGTTGCCGCCGCCACCGTGTTCGCGGGGGAACCCGCTcc                                                                                                                         >  1:323176/1‑150 (MQ=255)                   gcgGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTcc                                                                                                                         >  2:1103746/1‑150 (MQ=255)                        tattctcgcgCTAACCACGGCGGTGGGCACATATCGGGGTCGTAGTAGAACTATCTTCTCCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCa                                                                                                                    <  2:309469/144‑1 (MQ=17)                            cccGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGc                                                                                                                >  2:784553/1‑150 (MQ=255)                                    tACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTAc                                                                                                                      <  1:474391/136‑1 (MQ=255)                                    tACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTAc                                                                                                                      >  2:474391/1‑136 (MQ=255)                                    tACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGacac                                                                                                        >  2:106424/1‑150 (MQ=255)                                     aCCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGacaca                                                                                                       <  2:362203/150‑1 (MQ=255)                                       cACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGt                                                                                                              <  1:995192/141‑1 (MQ=255)                                       cACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGt                                                                                                              >  2:995192/1‑141 (MQ=255)                                       cACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGAcacaca                                                                                                     >  1:1069512/1‑150 (MQ=255)                                        aCGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACAt                                                                                                    >  1:409034/1‑150 (MQ=255)                                                     caTATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTGGTa                                                                                       >  2:543676/1‑150 (MQ=255)                                                      atatCGGGGTCGTCGTAGGCGAGGGTTCAACAGGGAAGAGGCCGCGACTGCTGGCAAATATCCATTTGCCGTTCCCCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAg                                                                                      <  2:504583/150‑1 (MQ=17)                                                        tcaagtcctaccatacaagcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTCGCGGGTGAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGa                                                                                    >  1:721099‑M1/94‑150 (MQ=255)                                                        atCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGa                                                                                    >  2:1019540/1‑150 (MQ=255)                                                            gggTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCgg                                                                                <  2:390891/150‑1 (MQ=255)                                                            gggTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCgg                                                                                <  2:681814/150‑1 (MQ=255)                                                            gggTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCgg                                                                                <  1:784553/150‑1 (MQ=255)                                                            gggTCGACGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCgg                                                                                <  2:1058026/150‑1 (MQ=255)                                                             ggTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCggg                                                                               <  1:485310/150‑1 (MQ=255)                                                                taccatacaagcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcgcggcctcTTCGCgg                                                                                                                                      >  2:423048‑M1/86‑92 (MQ=255)                                                                taccatacaagcgggtttacccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcccggcctcTTCGCgg                                                                                                                                      <  1:423048‑M1/7‑1 (MQ=255)                                                                  tcgtAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCAc                                                                          <  1:197510/150‑1 (MQ=255)                                                                     tAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAAc                                                                                                                                >  2:1114891/1‑93 (MQ=39)                                                                     tAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAAc                                                                                                                                <  1:1114891/93‑1 (MQ=39)                                                                       ggAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCcgcg                                                                     >  2:187517/1‑150 (MQ=255)                                                                         aGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCCAGGCGTGGGCACACATCGCGGTAGTCGTAGGTGCGGACTCACTCGCGac                                                                   >  1:156952/1‑149 (MQ=17)                                                                          gCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCgg                                                                                                                                      <  1:367940/82‑1 (MQ=40)                                                                           cGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAaga                                                                 <  1:1086369/150‑1 (MQ=255)                                                                           cGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAaga                                                                 <  1:508093/150‑1 (MQ=255)                                                                            gggtttacccgagaatacggtgggggtgccaacgcggaacggcaggtggagattggccagctggcccggcctcTTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAagag                                                                >  1:976076‑M1/74‑150 (MQ=255)                                                                            gggTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCt                                                                                                                        >  1:387460/1‑94 (MQ=255)                                                                            gggTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCt                                                                                                                        <  2:387460/94‑1 (MQ=255)                                                                             ggTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGaca                                                                                                         >  2:304803/1‑108 (MQ=255)                                                                             ggTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGaca                                                                                                         <  1:304803/108‑1 (MQ=255)                                                                                  aCCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCgg                                                                                                                                      >  1:347842/1‑74 (MQ=255)                                                                                    ccgcgaatacggtggtggcggcaacgctgaacggcaggtggagattggccagcaggcgcggcctcTTCGCGGGt                                                                                                                                    <  2:347842‑M1/9‑1 (MQ=255)                                                                                    ccGCGCAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGcc                                                        >  2:130268/1‑150 (MQ=255)                                                                                        gAAGAGGCCGCGCCTGCCGGCCACTCTCTCCCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCctgct                                                    <  2:816295/150‑1 (MQ=255)                                                                                             ggCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGaa                                                                   >  2:1062161/1‑130 (MQ=255)                                                                                             ggCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGaa                                                                   <  1:1062161/130‑1 (MQ=255)                                                                                              gCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTa                                                                                       <  1:389492/109‑1 (MQ=255)                                                                                              gCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTa                                                                                       >  2:389492/1‑109 (MQ=255)                                                                                              gCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGCTCACCCGCGAAGAGGCCGGGCCCGCTGGCCaa                                              >  2:658790/1‑150 (MQ=255)                                                                                               ccGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAAt                                             <  1:106424/150‑1 (MQ=255)                                                                                                cgctCCTGCCCGCCAATCCCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAACCCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAAtc                                            <  2:383064/150‑1 (MQ=17)                                                                                                 gcgcCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAAtct                                           >  1:655193/1‑150 (MQ=255)                                                                                                 gcgcCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCCGGTTCACCCGCGAAGAGGCCGGGCCGGCTGGCCAAtcg                                           >  2:114997/1‑149 (MQ=255)                                                                                                     ctgctgGCCACTCCCCCCCTGCCGTTCAGCGTTGCCGCCGCCACTGTACTCGCGGGTACGCCCGCTCCTACCAGGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCAc                                       <  2:409034/150‑1 (MQ=17)                                                                                                     ctgctgGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCAc                                       >  1:839276/1‑150 (MQ=255)                                                                                                        ctgGCCAACCTCCACCTTCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTg                                    <  2:280589/150‑1 (MQ=255)                                                                                                         tgGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTTGTACCGCGGCGTGGACACACATCACGAGCGTCGTAGGAGCGGGTTCAGCCGCGAAGAGCCGGTGCCGGCTGGCCAATCTCCACCtcc                                   >  2:529128/1‑148 (MQ=17)                                                                                                            ccAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGt                                <  1:130268/150‑1 (MQ=255)                                                                                                             cAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGtt                               <  1:187517/150‑1 (MQ=255)                                                                                                             cAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGtt                               >  2:916028/1‑150 (MQ=255)                                                                                                                    ggcaggtggagattggccagcaggcccggcctcTTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCgg                                                                                >  2:522019‑M1/34‑94 (MQ=255)                                                                                                                    ggcaggtggagattggccagcaggcccggcctcTTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCgg                                                                                <  1:522019‑M1/61‑1 (MQ=255)                                                                                                                    cACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGtt                        <  1:396851/150‑1 (MQ=255)                                                                                                                                 gCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCg           >  1:771856/1‑150 (MQ=255)                                                                                                                                    ttGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACAGGGCGGGCGTCGTAGGAGCGGGCTCACCCGCGAAGAGGCCGGGCCTGCTGGGCAATCTCCACCTGCCGTTCAGCGTAGCCGCCACCCCCGTaa        >  2:230329/1‑149 (MQ=17)                                                                                                                                       ccgccgccACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTcg     >  1:962942/1‑150 (MQ=255)                                                                                                                                          ccgccgccgTATCCGCGGGTAACCCCGCTCCTCCCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCgg  <  2:1069512/150‑1 (MQ=255)                                                                                                                                                ccGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCcgc                                                                      <  2:890746/76‑1 (MQ=255)                                                                                                                                                ccGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCcgc                                                                      >  1:890746/1‑76 (MQ=255)                                                                                                                                                     |                                                                                                                                           GCTGCCGCCACCGTATTCGCGGGTAAACCCGCGCCTACCACGGCGGTGGGCACATATCGGGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGCGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACCACGGCGTGGACACACATCGCGGTCGTCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGGCCTGCTGGCCAATCTCCACCTGCCGTTCAGCGTTGCCGCCACCACCGTATTCGCGG  >  NC_002947/5756566‑5756852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.