New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2731002 =	44 (1.020)	4 (0.100)	4/240	NT	9.8%	coding (296/2361 nt)	polB	DNA polymerase II
	?	NC_002947	2731040 =	32 (0.780)					coding (334/2361 nt)	polB	DNA polymerase II

GGGACGAAGCTCAAGCCACTGCGCCTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTACCGGGACGCCCAGCTCAAGCCGCAGCCAGGCTATCGCCCGGCGCTGCGCCTGGTGTCGCTGGATATCGAG  >  NC_002947/2730893‑2731186                                                                                                                                                    |                                                                                                                                                   gggACGAAGCTCAAGCCACTGCGCCTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGccgccg                                                                                                                                                  <  2:448740/150‑1 (MQ=255)    aCGAAGCTCAAGCCACTGCGCCTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCACCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAg                                                                                                                                               <  1:937250/150‑1 (MQ=255)             aaGCCACTGCGCCTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTc                                                                                                                                      >  1:417559/1‑150 (MQ=255)                  aCTGCGCCTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACATCATGGa                                                                                                                                 >  2:631800/1‑150 (MQ=255)                   cTGCGCCTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCACCTGGAGCAGCGTCTGCGCACTGCCGTTACCGACTTTTTGGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAg                                                                                                                                >  2:678494/1‑150 (MQ=255)                    tGCGCCTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAgc                                                                                                                               <  2:540663/150‑1 (MQ=255)                         cTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGa                                                                                                                                                >  1:339530/1‑128 (MQ=255)                         cTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGa                                                                                                                                                <  2:339530/128‑1 (MQ=255)                                 cTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGGGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTGACCTCATGGAGCGCTTCATCGCGGc                                                                                                                  >  2:554633/1‑150 (MQ=255)                                  ttCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCa                                                                                                                 >  2:658873/1‑150 (MQ=255)                                     gAGCATCGGGCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCg                                                                                                              >  2:633198/1‑150 (MQ=255)                                          tCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCa                                                                                                         <  1:137780/150‑1 (MQ=255)                                          tCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCa                                                                                                         >  2:771369/1‑150 (MQ=255)                                             cccGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGtt                                                                                                      >  1:807634/1‑150 (MQ=255)                                                gATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCAc                                                                                                   <  2:507627/150‑1 (MQ=255)                                                   gCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCAATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTgg                                                                                                >  2:881908/1‑150 (MQ=255)                                                           tctATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTTATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCgg                                                                                        >  2:310264/1‑150 (MQ=255)                                                             tatcCCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCTTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGAt                                                                                      <  1:63594/150‑1 (MQ=255)                                                             tataCCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGAt                                                                                      >  1:154392/1‑150 (MQ=255)                                                               taCCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATgc                                                                                    <  2:1071568/150‑1 (MQ=255)                                                                    gCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAgg                                                                               <  1:771369/150‑1 (MQ=255)                                                                    gCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCAATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAgg                                                                               <  1:881908/150‑1 (MQ=255)                                                                     ccAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAggg                                                                              <  2:912361/150‑1 (MQ=255)                                                                       aGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCg                                                                            <  1:1001974/150‑1 (MQ=255)                                                                           tCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGCCCAGCCGGATCCGCAGGGCGtttc                                                                        >  2:83898/1‑149 (MQ=255)                                                                              ccAATTGATGCAACTGGAGCAGCGTCTGCGCTCGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTCGCCAGCCGGATGCGCAGGGCGTTTACCg                                                                     <  2:581513/150‑1 (MQ=255)                                                                              ccAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTACCg                                                                     >  1:660847/1‑150 (MQ=255)                                                                                                         gcgcACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTACCGGGACGCCCAGCTCAAGCCGCAGCCAgg                                          <  1:717429/150‑1 (MQ=255)                                                                                                             aCGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTACCGGGACGCCCAGCCCAAGCCGCAGCCAGGCTAt                                      >  1:446919/1‑150 (MQ=255)                                                                                                                GCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTACCGGGACGCCCAGCTCAAGCCGCAGc                                              >  2:838440‑M1/1‑139 (MQ=255)                                                                                                                GCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTACCGGGACGCCCAGCTCAAGCCGCAGc                                              <  1:838440‑M1/139‑1 (MQ=255)                                                                                                                 ccggatatcggcctcgaacacgtcgataccggccgCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTAc                                                                       <  2:940662‑M2/78‑1 (MQ=255)                                                                                                                 ccggatatcggcctcgaacacgtcgataccggccgCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTAc                                                                       >  1:940662‑M2/36‑113 (MQ=255)                                                                                                                   ggatatcggcctcgaacacgtcgataccggccgCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAggg                                                                              <  2:304839‑M2/71‑1 (MQ=255)                                                                                                                   ggatatcggcctcgaacacgtcgataccggccgCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAggg                                                                              >  1:304839‑M2/34‑104 (MQ=255)                                                                                                                          aCGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTACCGGGACGCCCAGCTCAAGCCGCAGCCAGGCTATCGCCCGGCGCTgc                         <  2:804983/150‑1 (MQ=255)                                                                                                                              gtTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTACCGGGACGCCCAGCTCAAGCCGCAGCCAGGCTATCGCCCGGCGCTGCGCCt                     <  1:658873/150‑1 (MQ=255)                                                                                                                               ttCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTACCGGGACGCCCAGCTCAAGCCGCAGCCAGGCTATCGCCCGGCGCTGCGCCTg                    >  2:812566/1‑150 (MQ=255)                                                                                                                                   aGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTACCGGGACGCCCAGCTCAAGCCGCAGCCAGGCTATCGCCCGGCGCTGCGCCTGgtgt                >  1:389080/1‑150 (MQ=255)                                                                                                                                       cGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGAGTAGGGCGTTTACCGCGACGGCCAGCTCAAGCCGCAGCCAGGCTATCGCCCGGCGCTGCGCCTGGTGTCGCt            <  1:981961/150‑1 (MQ=255)                                                                                                                                       cGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCACACTCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTACCGGGACGCCCAGCTCAAGCCGCAGCCAGGCTATCGCCCGGCGCTGCGCCTGGTGTCGCt            <  1:561348/150‑1 (MQ=255)                                                                                                                                        gATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTACCGGGACGCCCAGCTCAAGCCGCAGCCAGGCTATCGCCCGGCGCTGCGCCTGGTGTCGCTg           <  1:633198/150‑1 (MQ=255)                                                                                                                                        gATATCCGGCCGCCGGAGCGTTACATCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTACCGGGACGCCCAGCTCAAGCCGCAGCCAGGCTATCGCCCGGCGCTGCGCCTGGTGTCGCTg           <  1:631800/150‑1 (MQ=255)                                                                                                                                                 ccgCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTACCGGGACGCCCAGCTCAAGCCGCAGCCAGGCTATCGCCCGGCGCTGCGCCTGGTGTCGCTGGATATCgag  <  1:934054‑M2/147‑1 (MQ=255)                                                                                                                                                 ccgCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTACCGGGACGCCCAGCTCAAGCCGCAGCCAGGCTATCGCCCGGCGCTGCGCCTGGTGTCGCTGGATATCgag  >  2:847234‑M2/4‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                   GGGACGAAGCTCAAGCCACTGCGCCTGAAGGACTTCGAGCATCGCCCGATGCTCGGCCTCTATACCCGCCAGCATCGCCAATTGATGCAACTGGAGCAGCGTCTGCGCACGGCCGGTATCGACGTGTTCGAGGCCGATATCCGGCCGCCGGAGCGTTACCTCATGGAGCGCTTCATCACGGCACCGGTGCAGTTCACTGGCCAGCCGGATGCGCAGGGCGTTTACCGGGACGCCCAGCTCAAGCCGCAGCCAGGCTATCGCCCGGCGCTGCGCCTGGTGTCGCTGGATATCGAG  >  NC_002947/2730893‑2731186

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.